Protein–RNA interactions for Protein: Q16385

SSX2, Protein SSX2, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2Q16385 SCARNA8-201ENST00000515924 131 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 RNU6-720P-201ENST00000516363 108 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 SNORA62.5-201ENST00000516634 120 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 AC144568.1-201ENST00000520139 137 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 AC022523.2-201ENST00000561045 150 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 EIF1P4-201ENST00000572664 335 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 AC005730.3-201ENST00000583067 366 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 MIR4264-201ENST00000583520 66 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 AP003357.1-201ENST00000604497 148 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 uc_338.4-201ENST00000616635 176 ntBASIC0.14□□□□□ -2.39
SSX2Q16385 SNORD114-26-201ENST00000363543 72 ntBASIC0.13□□□□□ -2.39
SSX2Q16385 Y_RNA.605-201ENST00000410577 105 ntBASIC0.13□□□□□ -2.39
SSX2Q16385 SNORA40.8-201ENST00000411034 126 ntBASIC0.13□□□□□ -2.39
SSX2Q16385 RNU7-56P-201ENST00000458744 62 ntBASIC0.13□□□□□ -2.39
SSX2Q16385 RNU6-718P-201ENST00000516166 105 ntBASIC0.13□□□□□ -2.39
SSX2Q16385 AC008507.4-201ENST00000585464 127 ntBASIC0.13□□□□□ -2.39
SSX2Q16385 Y_RNA.230-201ENST00000364348 109 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 U8.7-201ENST00000364940 136 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 RNU6-1175P-201ENST00000365200 107 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 Y_RNA.540-201ENST00000384638 111 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 SNORD72-201ENST00000390994 80 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 MIR548F1-201ENST00000408667 84 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 RNU6-847P-201ENST00000411115 108 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 AC090844.1-201ENST00000422019 156 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 RNU7-4P-201ENST00000516961 62 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 RN7SKP295-201ENST00000517264 153 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.12□□□□□ -2.39
SSX2Q16385 AC127455.1-201ENST00000565496 145 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 AC090517.2-201ENST00000614966 680 ntBASIC0.12□□□□□ -2.39
SSX2Q16385 Y_RNA.205-201ENST00000364128 113 ntBASIC0.11□□□□□ -2.39
SSX2Q16385 Y_RNA.456-201ENST00000384232 111 ntBASIC0.11□□□□□ -2.39
SSX2Q16385 MIR1278-201ENST00000408753 81 ntBASIC0.11□□□□□ -2.39
SSX2Q16385 RNU4-14P-201ENST00000410858 122 ntBASIC0.11□□□□□ -2.39
SSX2Q16385 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.11□□□□□ -2.39
SSX2Q16385 Z83846.1-201ENST00000446798 265 ntBASIC0.11□□□□□ -2.39
SSX2Q16385 RNU7-62P-201ENST00000458856 62 ntBASIC0.11□□□□□ -2.39
SSX2Q16385 MIR4431-201ENST00000579990 94 ntBASIC0.11□□□□□ -2.39
SSX2Q16385 MIR5188-201ENST00000583467 113 ntBASIC0.11□□□□□ -2.39
SSX2Q16385 SNORA25.18-201ENST00000607153 114 ntBASIC0.11□□□□□ -2.39
SSX2Q16385 Y_RNA.646-201ENST00000410980 101 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 AL358176.2-201ENST00000425769 204 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.1□□□□□ -2.39
SSX2Q16385 AC005042.3-201ENST00000453230 174 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 MTND4P17-201ENST00000470444 350 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 AC091951.2-201ENST00000500762 203 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 RNU2-13P-201ENST00000515909 113 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 RNU7-115P-201ENST00000516433 55 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 RNA5SP94-201ENST00000516917 108 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 DEFB117-201ENST00000602356 141 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 MIR548AY-201ENST00000617669 107 ntBASIC0.1□□□□□ -2.39
SSX2Q16385 RNU4-67P-201ENST00000364569 141 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 RNU6-708P-201ENST00000384217 107 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 MIR628-201ENST00000385229 95 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 MIR938-201ENST00000401216 83 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 AF228730.4-201ENST00000421457 183 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 BTF3P11-201ENST00000426582 477 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 RNU7-30P-201ENST00000516835 62 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 RPL23AP91-201ENST00000569211 455 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 uc_338.6-201ENST00000613544 171 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 AC002553.4-201ENST00000616896 331 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 TPTEP1-208ENST00000636884 213 ntBASIC0.09□□□□□ -2.4
SSX2Q16385 Y_RNA.476-201ENST00000384347 108 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 Y_RNA.570-201ENST00000384750 101 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 SNORA75.6-201ENST00000391318 127 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 AL603910.2-201ENST00000407268 136 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 MIR1277-201ENST00000408536 78 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 AC073261.1-201ENST00000429409 121 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 SNORA18.4-201ENST00000516440 124 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 AC008608.1-201ENST00000603910 127 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 U2.1-201ENST00000618978 145 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 U6.92-201ENST00000636464 89 ntBASIC0.08□□□□□ -2.4
SSX2Q16385 MIR330-201ENST00000362196 94 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 Y_RNA.314-201ENST00000365114 102 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 RNU6-310P-201ENST00000384655 107 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 RNU6-370P-201ENST00000411008 104 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 AC091959.1-201ENST00000495857 238 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 AP003327.1-201ENST00000529684 127 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 MIR2681-201ENST00000581814 105 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 AC006441.5-201ENST00000612680 209 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 MIR8087-201ENST00000612745 78 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 AC010332.2-201ENST00000613083 1904 ntBASIC0.07□□□□□ -2.4
SSX2Q16385 Y_RNA.331-201ENST00000365267 102 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
SSX2Q16385 RNU6-890P-201ENST00000384121 107 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 Y_RNA.466-201ENST00000384294 113 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 RNU6-364P-201ENST00000384387 107 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 SNORD100-201ENST00000408573 76 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 Y_RNA.599-201ENST00000410489 109 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 AC024067.1-201ENST00000426199 223 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 AC096644.2-201ENST00000429278 159 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 AL589823.1-201ENST00000429577 183 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 AC069439.1-201ENST00000494739 167 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 AL080274.1-201ENST00000605565 220 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 uc_338.16-201ENST00000621804 95 ntBASIC0.06□□□□□ -2.4
SSX2Q16385 RNU6-815P-201ENST00000384080 113 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms