Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 U8.17-201ENST00000391292 132 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.2□□□□□ -2.38
FOXF1Q12946 Y_RNA.599-201ENST00000410489 109 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 RNU2-70P-201ENST00000410718 179 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 AC090844.1-201ENST00000422019 156 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 HMGN1P10-201ENST00000474557 553 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 AC091951.2-201ENST00000500762 203 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 SCARNA8-201ENST00000515924 131 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 RNU6-470P-201ENST00000515954 104 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 RNU6-1007P-201ENST00000516586 107 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 AC024405.2-202ENST00000532731 184 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 MIR548AO-201ENST00000579992 96 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 MIR4300-201ENST00000581016 96 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 MIR4264-201ENST00000583520 66 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 POLR3GP1-201ENST00000594073 261 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 uc_338.6-201ENST00000613544 171 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 AC015726.2-201ENST00000620112 122 ntBASIC0.2□□□□□ -2.38
FOXF1Q12946 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.2□□□□□ -2.38
FOXF1Q12946 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
FOXF1Q12946 RNU6-1327P-201ENST00000365302 105 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 AL590004.1-201ENST00000405321 300 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 RNU6-370P-201ENST00000411008 104 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 SNORD83.1-201ENST00000411362 77 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 RNU7-115P-201ENST00000516433 55 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 RNU7-181P-201ENST00000517234 74 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 RPL23AP91-201ENST00000569211 455 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 AP000753.3-201ENST00000604083 169 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 AC133104.2-201ENST00000615272 193 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 MIR548AY-201ENST00000617669 107 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 U6.92-201ENST00000636464 89 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 AC073869.6-201ENST00000640656 341 ntBASIC0.19□□□□□ -2.38
FOXF1Q12946 MIR103A1-201ENST00000362165 78 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 RNU6-490P-201ENST00000362985 107 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 RNU6-1209P-201ENST00000363655 107 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 RNU6-1048P-201ENST00000364054 107 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 SNORA63C-201ENST00000364578 129 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 Y_RNA.813-201ENST00000364639 102 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 RNU6-1175P-201ENST00000365200 107 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 SNORA24-201ENST00000384096 131 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 RNU6-890P-201ENST00000384121 107 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 MIR628-201ENST00000385229 95 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 RNU6-205P-201ENST00000390858 107 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 Y_RNA.605-201ENST00000410577 105 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 RNU6-847P-201ENST00000411115 108 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 AF228730.4-201ENST00000421457 183 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.18□□□□□ -2.38
FOXF1Q12946 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.18□□□□□ -2.38
FOXF1Q12946 MIR3145-201ENST00000580727 82 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 VN1R91P-201ENST00000594377 169 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 AC020891.4-201ENST00000605745 93 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 AC093783.1-201ENST00000612976 329 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 AC022306.2-201ENST00000617563 647 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 MTND1P7-201ENST00000632801 297 ntBASIC0.18□□□□□ -2.38
FOXF1Q12946 MIR18A-201ENST00000362310 71 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 SNORD81.1-201ENST00000363064 77 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 U8.7-201ENST00000364940 136 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 MIR802-201ENST00000390235 94 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 SNORD72-201ENST00000390994 80 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 MTCO2P33-201ENST00000402100 465 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 RNU2-14P-201ENST00000411053 191 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 FCF1P9-201ENST00000412546 282 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 PDCL2P1-201ENST00000419302 352 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.17□□□□□ -2.38
FOXF1Q12946 MTCO3P10-201ENST00000455912 772 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 AC005730.3-201ENST00000583067 366 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 RN7SL793P-201ENST00000583259 296 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 LARP7P1-201ENST00000605576 316 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 MIR4791-201ENST00000607666 84 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 uc_338.4-201ENST00000616635 176 ntBASIC0.17□□□□□ -2.38
FOXF1Q12946 Y_RNA.393-201ENST00000383936 102 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 SNORD63-201ENST00000384262 68 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 RNU6-125P-201ENST00000384505 107 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 MIR559-201ENST00000385188 96 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 RNU6-679P-201ENST00000391003 106 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.16□□□□□ -2.38
FOXF1Q12946 SNORD11-201ENST00000459124 84 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 RNU6-437P-201ENST00000459408 95 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 RPL23AP54-201ENST00000495129 419 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 Y_RNA.655-201ENST00000515919 96 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 AL080274.1-201ENST00000605565 220 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 AL162730.1-201ENST00000605734 292 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 AL138825.1-201ENST00000618587 192 ntBASIC0.16□□□□□ -2.38
FOXF1Q12946 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.16□□□□□ -2.38
FOXF1Q12946 SNORD44.1-201ENST00000363202 61 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 RNU4-40P-201ENST00000364351 143 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 RNU6-934P-201ENST00000365154 107 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 Y_RNA.474-201ENST00000384341 102 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 RNY1P4-201ENST00000384595 115 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 MIR520H-201ENST00000385126 88 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 AL603910.2-201ENST00000407268 136 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.15□□□□□ -2.39
FOXF1Q12946 Y_RNA.653-201ENST00000459091 95 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 snoU13.16-201ENST00000459350 104 ntBASIC0.15□□□□□ -2.39
FOXF1Q12946 RNU6-863P-201ENST00000515989 104 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms