Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 IGKV3-31-201ENST00000523109 329 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 MIR378D2-201ENST00000580636 98 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 MIR4524B-201ENST00000581569 115 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 AL773524.1-201ENST00000614065 229 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 MTND1P7-201ENST00000632801 297 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
SSRP1Q08945 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSRP1Q08945 Y_RNA.336-201ENST00000365307 109 ntBASIC2.37□□□□□ -2.03
SSRP1Q08945 U8.16-201ENST00000391279 133 ntBASIC2.37□□□□□ -2.03
SSRP1Q08945 SUMO1P3-201ENST00000439961 304 ntBASIC2.37□□□□□ -2.03
SSRP1Q08945 AC099513.1-201ENST00000490423 301 ntBASIC2.37□□□□□ -2.03
SSRP1Q08945 AC090255.1-201ENST00000495779 349 ntBASIC2.37□□□□□ -2.03
SSRP1Q08945 AC114811.1-201ENST00000507207 168 ntBASIC2.37□□□□□ -2.03
SSRP1Q08945 AL513423.1-201ENST00000621695 132 ntBASIC2.37□□□□□ -2.03
SSRP1Q08945 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSRP1Q08945 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.37□□□□□ -2.03
SSRP1Q08945 RNA5SP37-201ENST00000365420 130 ntBASIC2.36□□□□□ -2.03
SSRP1Q08945 RNU6-1130P-201ENST00000365434 107 ntBASIC2.36□□□□□ -2.03
SSRP1Q08945 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.36□□□□□ -2.03
SSRP1Q08945 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SSRP1Q08945 MIR4648-201ENST00000580107 72 ntBASIC2.36□□□□□ -2.03
SSRP1Q08945 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
SSRP1Q08945 AC002984.1-201ENST00000591692 448 ntBASIC2.36□□□□□ -2.03
SSRP1Q08945 AL365434.2-201ENST00000607979 234 ntBASIC2.36□□□□□ -2.03
SSRP1Q08945 Y_RNA.783-201ENST00000613546 102 ntBASIC2.36□□□□□ -2.03
SSRP1Q08945 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SSRP1Q08945 Y_RNA.521-201ENST00000384560 114 ntBASIC2.35□□□□□ -2.03
SSRP1Q08945 MIR548M-201ENST00000408260 86 ntBASIC2.35□□□□□ -2.03
SSRP1Q08945 RNU6-717P-201ENST00000459076 104 ntBASIC2.35□□□□□ -2.03
SSRP1Q08945 RNU6-1116P-201ENST00000517269 99 ntBASIC2.35□□□□□ -2.03
SSRP1Q08945 MTND5P41-201ENST00000517498 206 ntBASIC2.35□□□□□ -2.03
SSRP1Q08945 MIR4769-201ENST00000584126 77 ntBASIC2.35□□□□□ -2.03
SSRP1Q08945 DNAJC19P2-201ENST00000593340 302 ntBASIC2.35□□□□□ -2.03
SSRP1Q08945 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.35□□□□□ -2.03
SSRP1Q08945 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
SSRP1Q08945 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SSRP1Q08945 RNU6-833P-201ENST00000363486 107 ntBASIC2.34□□□□□ -2.03
SSRP1Q08945 Y_RNA.393-201ENST00000383936 102 ntBASIC2.34□□□□□ -2.03
SSRP1Q08945 MIR17-201ENST00000385012 84 ntBASIC2.34□□□□□ -2.03
SSRP1Q08945 MIR891A-201ENST00000401237 79 ntBASIC2.34□□□□□ -2.03
SSRP1Q08945 AL445646.1-201ENST00000431784 216 ntBASIC2.34□□□□□ -2.03
SSRP1Q08945 SNORD116-25-201ENST00000516517 92 ntBASIC2.34□□□□□ -2.03
SSRP1Q08945 RNU6-504P-201ENST00000516568 104 ntBASIC2.34□□□□□ -2.03
SSRP1Q08945 AC022254.1-201ENST00000567857 235 ntBASIC2.34□□□□□ -2.03
SSRP1Q08945 Y_RNA.66-201ENST00000362862 102 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 RNY1P5-201ENST00000383890 115 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 RNU6-746P-201ENST00000384112 109 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 SNRPGP14-201ENST00000435400 219 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 PGBD4P5-201ENST00000445958 426 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 RPL23AP6-201ENST00000446637 472 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 RNU7-12P-201ENST00000516030 62 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 RNU7-200P-201ENST00000516105 62 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 AC006441.5-201ENST00000612680 209 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 Y_RNA.778-201ENST00000620203 90 ntBASIC2.33□□□□□ -2.04
SSRP1Q08945 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SSRP1Q08945 MIR424-201ENST00000362227 98 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 RNU6-978P-201ENST00000364371 103 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 RNU6-597P-201ENST00000365620 102 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 SNORD24-201ENST00000383884 75 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 Y_RNA.506-201ENST00000384494 102 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 MIR660-201ENST00000385235 97 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.32□□□□□ -2.04
SSRP1Q08945 SNRPGP13-201ENST00000442212 177 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 Y_RNA.666-201ENST00000516187 112 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 Y_RNA.703-201ENST00000516846 111 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 MIR4299-201ENST00000577899 72 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 MIR5089-201ENST00000580047 84 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 MIR4713-201ENST00000582691 75 ntBASIC2.32□□□□□ -2.04
SSRP1Q08945 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
SSRP1Q08945 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.31□□□□□ -2.04
SSRP1Q08945 RNU6-414P-201ENST00000363705 104 ntBASIC2.31□□□□□ -2.04
SSRP1Q08945 RNU6-151P-201ENST00000364158 107 ntBASIC2.31□□□□□ -2.04
SSRP1Q08945 RNU6-268P-201ENST00000364174 107 ntBASIC2.31□□□□□ -2.04
SSRP1Q08945 RNU6-768P-201ENST00000384683 107 ntBASIC2.31□□□□□ -2.04
SSRP1Q08945 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SSRP1Q08945 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.31□□□□□ -2.04
SSRP1Q08945 MIR3646-201ENST00000578301 84 ntBASIC2.31□□□□□ -2.04
SSRP1Q08945 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
SSRP1Q08945 SNORD3E-202ENST00000627253 216 ntBASIC2.31□□□□□ -2.04
SSRP1Q08945 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.31□□□□□ -2.04
SSRP1Q08945 AC131280.1-202ENST00000624067 4211 ntBASIC2.31□□□□□ -2.04
SSRP1Q08945 RNU6-1123P-201ENST00000362347 106 ntBASIC2.3□□□□□ -2.04
SSRP1Q08945 RNU6-661P-201ENST00000362409 107 ntBASIC2.3□□□□□ -2.04
SSRP1Q08945 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SSRP1Q08945 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.3□□□□□ -2.04
SSRP1Q08945 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.3□□□□□ -2.04
SSRP1Q08945 MIR3133-201ENST00000583157 78 ntBASIC2.3□□□□□ -2.04
SSRP1Q08945 MIR3658-201ENST00000636291 56 ntBASIC2.3□□□□□ -2.04
SSRP1Q08945 AP000553.5-201ENST00000641933 54 ntBASIC2.3□□□□□ -2.04
SSRP1Q08945 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SSRP1Q08945 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SSRP1Q08945 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SSRP1Q08945 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SSRP1Q08945 RNU6-888P-201ENST00000363010 101 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 RNU6-774P-201ENST00000363238 107 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 SNORA25.7-201ENST00000364375 127 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 Y_RNA.400-201ENST00000383963 111 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 SNORD61-201ENST00000384252 73 ntBASIC2.29□□□□□ -2.04
SSRP1Q08945 SNORD38C-201ENST00000384381 69 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms