Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 Y_RNA.61-201ENST00000362835 102 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 Y_RNA.394-201ENST00000383942 103 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 SNORA72.4-201ENST00000384174 132 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 Y_RNA.540-201ENST00000384638 111 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 MIR15B-201ENST00000385045 98 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
GABPAQ06546 MTCO2P33-201ENST00000402100 465 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 MIR1252-201ENST00000408861 65 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.94□□□□□ -2.26
GABPAQ06546 snoU13.25-201ENST00000458945 104 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 RNU6-437P-201ENST00000459408 95 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 RPS26P48-201ENST00000491713 339 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 RNU6-191P-201ENST00000516295 94 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 MIR4764-201ENST00000580680 88 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 MIR2681-201ENST00000581814 105 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 RAC1P9-201ENST00000604990 392 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 AL391903.3-201ENST00000612158 163 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
GABPAQ06546 SNORA25.3-201ENST00000363205 127 ntBASIC0.93□□□□□ -2.26
GABPAQ06546 RNU6-102P-201ENST00000384485 104 ntBASIC0.93□□□□□ -2.26
GABPAQ06546 Y_RNA.569-201ENST00000384749 103 ntBASIC0.93□□□□□ -2.26
GABPAQ06546 MIR19B1-201ENST00000384829 87 ntBASIC0.93□□□□□ -2.26
GABPAQ06546 SNORD115-46-201ENST00000390982 71 ntBASIC0.93□□□□□ -2.26
GABPAQ06546 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.93□□□□□ -2.26
GABPAQ06546 SNORD123-201ENST00000459473 70 ntBASIC0.93□□□□□ -2.26
GABPAQ06546 SNORD124-201ENST00000459577 104 ntBASIC0.93□□□□□ -2.26
GABPAQ06546 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
GABPAQ06546 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.93□□□□□ -2.26
GABPAQ06546 RPL23AP91-201ENST00000569211 455 ntBASIC0.93□□□□□ -2.26
GABPAQ06546 RNU4-90P-201ENST00000362773 141 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 RNA5SP264-201ENST00000363115 107 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 RNY1-201ENST00000364228 113 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 Y_RNA.222-201ENST00000364264 102 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 Y_RNA.330-201ENST00000365230 109 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 RNU6-969P-201ENST00000383900 105 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 Y_RNA.418-201ENST00000384029 102 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 SNORD38C-201ENST00000384381 69 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 SNORA75.2-201ENST00000391138 150 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 SNORA26.5-201ENST00000391215 123 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 SNORA75.3-201ENST00000391231 150 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 HSPE1P25-201ENST00000455484 251 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 RNU7-21P-201ENST00000459430 62 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 NDUFA4P2-201ENST00000489989 244 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.92□□□□□ -2.26
GABPAQ06546 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 RNU7-41P-201ENST00000515917 61 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 RNA5SP436-201ENST00000516020 115 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 RNU6-496P-201ENST00000516145 99 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 RNU6-764P-201ENST00000516396 105 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 SNORA40.15-201ENST00000516884 107 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.92□□□□□ -2.26
GABPAQ06546 AC087685.1-201ENST00000587507 141 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 AC134503.1-201ENST00000633048 54 ntBASIC0.92□□□□□ -2.26
GABPAQ06546 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
GABPAQ06546 Y_RNA.138-201ENST00000363462 102 ntBASIC0.91□□□□□ -2.26
GABPAQ06546 SNORA22B-201ENST00000383876 138 ntBASIC0.91□□□□□ -2.26
GABPAQ06546 RNU6-442P-201ENST00000383968 104 ntBASIC0.91□□□□□ -2.26
GABPAQ06546 Y_RNA.535-201ENST00000384612 99 ntBASIC0.91□□□□□ -2.26
GABPAQ06546 MTCO2P12-201ENST00000427426 682 ntBASIC0.91□□□□□ -2.26
GABPAQ06546 RNU7-90P-201ENST00000459216 62 ntBASIC0.91□□□□□ -2.26
GABPAQ06546 MRPS35P2-201ENST00000508242 191 ntBASIC0.91□□□□□ -2.26
GABPAQ06546 RNY3P15-201ENST00000516297 97 ntBASIC0.91□□□□□ -2.26
GABPAQ06546 RNU7-43P-201ENST00000516554 64 ntBASIC0.91□□□□□ -2.26
GABPAQ06546 AC068700.1-201ENST00000565862 3754 ntBASIC0.9□□□□□ -2.27
GABPAQ06546 MIR103A2-201ENST00000362154 78 ntBASIC0.9□□□□□ -2.27
GABPAQ06546 RNU6-899P-201ENST00000363947 107 ntBASIC0.9□□□□□ -2.27
GABPAQ06546 SNORD114-24-201ENST00000365029 72 ntBASIC0.9□□□□□ -2.27
GABPAQ06546 AC098869.1-201ENST00000481627 292 ntBASIC0.9□□□□□ -2.27
GABPAQ06546 RNU6-1007P-201ENST00000516586 107 ntBASIC0.9□□□□□ -2.27
GABPAQ06546 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.27
GABPAQ06546 AC005357.1-201ENST00000588399 301 ntBASIC0.9□□□□□ -2.27
GABPAQ06546 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.9□□□□□ -2.27
GABPAQ06546 MIR6515-201ENST00000619843 57 ntBASIC0.9□□□□□ -2.27
GABPAQ06546 Y_RNA.105-201ENST00000363182 111 ntBASIC0.89□□□□□ -2.27
GABPAQ06546 RNU6-674P-201ENST00000363831 107 ntBASIC0.89□□□□□ -2.27
GABPAQ06546 RNU1-133P-201ENST00000364867 167 ntBASIC0.89□□□□□ -2.27
GABPAQ06546 Y_RNA.380-201ENST00000365663 111 ntBASIC0.89□□□□□ -2.27
GABPAQ06546 MIR548P-201ENST00000408336 84 ntBASIC0.89□□□□□ -2.27
GABPAQ06546 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.89□□□□□ -2.27
GABPAQ06546 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.89□□□□□ -2.27
GABPAQ06546 MIR548AR-201ENST00000582191 57 ntBASIC0.89□□□□□ -2.27
GABPAQ06546 AL512605.2-201ENST00000592972 256 ntBASIC0.89□□□□□ -2.27
GABPAQ06546 Pinc.1-201ENST00000616452 154 ntBASIC0.89□□□□□ -2.27
GABPAQ06546 PVT1_3.1-201ENST00000620853 95 ntBASIC0.89□□□□□ -2.27
GABPAQ06546 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
GABPAQ06546 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
GABPAQ06546 Y_RNA.136-201ENST00000363444 102 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 RNU6-1205P-201ENST00000363625 106 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 Y_RNA.216-201ENST00000364205 93 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 Y_RNA.527-201ENST00000384573 102 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 RNU6-763P-201ENST00000390865 106 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 MIR942-201ENST00000401111 86 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 MTCO1P5-201ENST00000433573 344 ntBASIC0.88□□□□□ -2.27
GABPAQ06546 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms