Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.36□□□□□ -2.63
HIST1H1AQ02539 AC011352.1-201ENST00000512300 793 ntBASIC-1.36□□□□□ -2.63
HIST1H1AQ02539 SNORA25.13-201ENST00000516395 103 ntBASIC-1.36□□□□□ -2.63
HIST1H1AQ02539 SNORA27.4-201ENST00000516650 95 ntBASIC-1.36□□□□□ -2.63
HIST1H1AQ02539 MIR4491-201ENST00000581087 68 ntBASIC-1.36□□□□□ -2.63
HIST1H1AQ02539 AC092807.2-201ENST00000609367 243 ntBASIC-1.36□□□□□ -2.63
HIST1H1AQ02539 RNA5SP245-201ENST00000364239 121 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 RNU6-282P-201ENST00000365357 103 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 RNY3P5-201ENST00000384127 102 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 SNORD110-201ENST00000408189 75 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 TPTE2P5-203ENST00000458118 728 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 AC021146.6-201ENST00000514659 117 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 AC245014.2-201ENST00000603689 287 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 AL121757.2-201ENST00000611223 313 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 AC007671.2-201ENST00000637344 619 ntBASIC-1.37□□□□□ -2.63
HIST1H1AQ02539 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 SNORD115-30-201ENST00000364117 82 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 RNU6-767P-201ENST00000384132 107 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 RNU6-790P-201ENST00000384479 105 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 SNORA72.6-201ENST00000384520 129 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 U8.15-201ENST00000390947 134 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 MTCYBP8-201ENST00000422855 651 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 RNU6-437P-201ENST00000459408 95 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 RNU7-175P-201ENST00000515915 61 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 RNU6-881P-201ENST00000516813 102 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 AC024405.2-202ENST00000532731 184 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 MIR4424-201ENST00000585257 86 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 AC008507.4-201ENST00000585464 127 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 POLR3GP2-201ENST00000588366 668 ntBASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.38□□□□□ -2.63
HIST1H1AQ02539 SNORD115-34-201ENST00000362441 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-12-201ENST00000362583 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-29-201ENST00000362834 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-9-201ENST00000362912 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-21-201ENST00000362963 81 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-14-201ENST00000363090 81 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-13-201ENST00000363358 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-41-201ENST00000363608 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-11-201ENST00000363616 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-5-201ENST00000363633 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-39-201ENST00000363694 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD113-7-201ENST00000363762 77 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-4-201ENST00000363810 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-16-201ENST00000363887 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-6-201ENST00000363942 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-42-201ENST00000364273 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-15-201ENST00000364809 81 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-1-201ENST00000364961 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-26-201ENST00000365067 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-10-201ENST00000365073 81 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-43-201ENST00000365503 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-36-201ENST00000365629 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 AC006210.1-201ENST00000424882 111 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 MTND3P23-201ENST00000431980 347 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORD115-40-201ENST00000606510 82 ntBASIC-1.39□□□□□ -2.63
HIST1H1AQ02539 SNORA69-201ENST00000383895 132 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 MIR204-201ENST00000385200 110 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 USP9YP16-201ENST00000430287 407 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 USP9YP23-201ENST00000455085 407 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 snoU13.11-201ENST00000459219 104 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 RNU6-625P-201ENST00000459412 107 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 AC092747.3-201ENST00000603769 301 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 AP000240.1-201ENST00000609910 452 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 JPX_2.1-201ENST00000614161 69 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 MIR6738-201ENST00000619620 64 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 AL138960.2-201ENST00000625145 535 ntBASIC-1.4□□□□□ -2.63
HIST1H1AQ02539 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.41□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.41□□□□□ -2.64
HIST1H1AQ02539 RNU4-75P-201ENST00000364621 146 ntBASIC-1.41□□□□□ -2.64
HIST1H1AQ02539 MTND2P9-201ENST00000422293 931 ntBASIC-1.41□□□□□ -2.64
HIST1H1AQ02539 MTATP6P17-201ENST00000431030 672 ntBASIC-1.41□□□□□ -2.64
HIST1H1AQ02539 RNU7-187P-201ENST00000458985 68 ntBASIC-1.41□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 AL606923.1-201ENST00000406616 190 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 CYCSP46-201ENST00000423569 204 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 SNORA19.2-201ENST00000516013 114 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 RNU7-53P-201ENST00000516705 60 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 AP000942.4-201ENST00000604811 241 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 AP001282.2-201ENST00000616149 309 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 AC022960.3-201ENST00000619794 441 ntBASIC-1.42□□□□□ -2.64
HIST1H1AQ02539 RNU6-181P-201ENST00000363225 107 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 SNORA63.5-201ENST00000363548 123 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 SNORD114-25-201ENST00000363742 72 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 RNU4-36P-201ENST00000364294 144 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 RNU6-455P-201ENST00000384681 107 ntBASIC-1.43□□□□□ -2.64
HIST1H1AQ02539 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms