Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.24□□□□□ -2.05
IRF9Q00978 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.24□□□□□ -2.05
IRF9Q00978 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.24□□□□□ -2.05
IRF9Q00978 AC104435.1-201ENST00000483483 166 ntBASIC2.24□□□□□ -2.05
IRF9Q00978 RNU6-693P-201ENST00000516134 107 ntBASIC2.24□□□□□ -2.05
IRF9Q00978 RNA5SP168-201ENST00000516642 112 ntBASIC2.24□□□□□ -2.05
IRF9Q00978 SNORA31.17-201ENST00000516953 127 ntBASIC2.24□□□□□ -2.05
IRF9Q00978 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
IRF9Q00978 RNU6-268P-201ENST00000364174 107 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 SNORD113-1-201ENST00000365321 69 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 RNU6-81P-201ENST00000365608 104 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 SNORA1-201ENST00000384107 130 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 SNORA40-201ENST00000388090 126 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 RNU6-460P-201ENST00000391158 108 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 MIR548O-201ENST00000408583 114 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 RNA5SP127-201ENST00000411051 133 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 SNORA18.4-201ENST00000516440 124 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 MIR3129-201ENST00000581095 76 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 MIR5007-201ENST00000583098 95 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 AC021506.2-201ENST00000612354 169 ntBASIC2.23□□□□□ -2.05
IRF9Q00978 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
IRF9Q00978 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
IRF9Q00978 MIR518F-201ENST00000384973 87 ntBASIC2.22□□□□□ -2.05
IRF9Q00978 MIR624-201ENST00000385217 97 ntBASIC2.22□□□□□ -2.05
IRF9Q00978 Y_RNA.584-201ENST00000391090 114 ntBASIC2.22□□□□□ -2.05
IRF9Q00978 RN7SL429P-201ENST00000479090 223 ntBASIC2.22□□□□□ -2.05
IRF9Q00978 RN7SL489P-201ENST00000486185 223 ntBASIC2.22□□□□□ -2.05
IRF9Q00978 RN7SL327P-201ENST00000488659 223 ntBASIC2.22□□□□□ -2.05
IRF9Q00978 RN7SL853P-201ENST00000617250 223 ntBASIC2.22□□□□□ -2.05
IRF9Q00978 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
IRF9Q00978 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.22□□□□□ -2.05
IRF9Q00978 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
IRF9Q00978 RNA5SP276-201ENST00000362580 94 ntBASIC2.21□□□□□ -2.06
IRF9Q00978 MTND4LP9-201ENST00000427694 174 ntBASIC2.21□□□□□ -2.06
IRF9Q00978 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.21□□□□□ -2.06
IRF9Q00978 RNA5SP57-201ENST00000459463 123 ntBASIC2.21□□□□□ -2.06
IRF9Q00978 AC099513.1-201ENST00000490423 301 ntBASIC2.21□□□□□ -2.06
IRF9Q00978 AC008413.1-201ENST00000511864 177 ntBASIC2.21□□□□□ -2.06
IRF9Q00978 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.21□□□□□ -2.06
IRF9Q00978 RNU7-25P-201ENST00000516544 62 ntBASIC2.21□□□□□ -2.06
IRF9Q00978 AC131055.1-201ENST00000584626 316 ntBASIC2.21□□□□□ -2.06
IRF9Q00978 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
IRF9Q00978 RNA5SP289-201ENST00000362332 137 ntBASIC2.2□□□□□ -2.06
IRF9Q00978 RNU6-833P-201ENST00000363486 107 ntBASIC2.2□□□□□ -2.06
IRF9Q00978 SNORA16B-201ENST00000364674 135 ntBASIC2.2□□□□□ -2.06
IRF9Q00978 MIR891A-201ENST00000401237 79 ntBASIC2.2□□□□□ -2.06
IRF9Q00978 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
IRF9Q00978 RNU7-12P-201ENST00000516030 62 ntBASIC2.2□□□□□ -2.06
IRF9Q00978 AL513423.1-201ENST00000621695 132 ntBASIC2.2□□□□□ -2.06
IRF9Q00978 AP001340.1-201ENST00000624405 217 ntBASIC2.2□□□□□ -2.06
IRF9Q00978 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
IRF9Q00978 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.2□□□□□ -2.06
IRF9Q00978 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
IRF9Q00978 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
IRF9Q00978 RNU6-1292P-201ENST00000383856 107 ntBASIC2.19□□□□□ -2.06
IRF9Q00978 SNORD38C-201ENST00000384381 69 ntBASIC2.19□□□□□ -2.06
IRF9Q00978 MIR221-201ENST00000385135 110 ntBASIC2.19□□□□□ -2.06
IRF9Q00978 AL606753.1-201ENST00000427435 87 ntBASIC2.19□□□□□ -2.06
IRF9Q00978 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
IRF9Q00978 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.19□□□□□ -2.06
IRF9Q00978 RNA5SP281-201ENST00000516504 135 ntBASIC2.19□□□□□ -2.06
IRF9Q00978 AP001328.1-201ENST00000528550 176 ntBASIC2.19□□□□□ -2.06
IRF9Q00978 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.19□□□□□ -2.06
IRF9Q00978 AC015726.2-201ENST00000620112 122 ntBASIC2.19□□□□□ -2.06
IRF9Q00978 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.19□□□□□ -2.06
IRF9Q00978 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
IRF9Q00978 AC008555.8-201ENST00000623602 2168 ntBASIC2.18□□□□□ -2.06
IRF9Q00978 RNU6-915P-201ENST00000364943 103 ntBASIC2.18□□□□□ -2.06
IRF9Q00978 Y_RNA.547-201ENST00000384654 119 ntBASIC2.18□□□□□ -2.06
IRF9Q00978 RNU6-360P-201ENST00000390944 104 ntBASIC2.18□□□□□ -2.06
IRF9Q00978 RNA5SP24-201ENST00000516478 95 ntBASIC2.18□□□□□ -2.06
IRF9Q00978 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.18□□□□□ -2.06
IRF9Q00978 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
IRF9Q00978 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
IRF9Q00978 AL442644.1-201ENST00000454390 3105 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 SNORD115-28-201ENST00000363931 81 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 RNU6-959P-201ENST00000384671 107 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 MIR660-201ENST00000385235 97 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 SNORD77.3-201ENST00000391113 65 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 AF228730.3-201ENST00000436691 102 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 PGBD4P5-201ENST00000445958 426 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.17□□□□□ -2.06
IRF9Q00978 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.17□□□□□ -2.06
IRF9Q00978 TUG1_4.1-201ENST00000619464 181 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 AC134878.1-201ENST00000619901 243 ntBASIC2.17□□□□□ -2.06
IRF9Q00978 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
IRF9Q00978 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.16□□□□□ -2.06
IRF9Q00978 Y_RNA.52-201ENST00000362760 96 ntBASIC2.16□□□□□ -2.06
IRF9Q00978 U8.1-201ENST00000362843 134 ntBASIC2.16□□□□□ -2.06
IRF9Q00978 Y_RNA.120-201ENST00000363304 110 ntBASIC2.16□□□□□ -2.06
IRF9Q00978 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
IRF9Q00978 MIR548I2-201ENST00000408348 149 ntBASIC2.16□□□□□ -2.06
IRF9Q00978 U7.2-201ENST00000607576 63 ntBASIC2.16□□□□□ -2.06
IRF9Q00978 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
IRF9Q00978 ICE2P2-201ENST00000483823 2787 ntBASIC2.15□□□□□ -2.06
IRF9Q00978 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
IRF9Q00978 MIR424-201ENST00000362227 98 ntBASIC2.15□□□□□ -2.07
IRF9Q00978 MIR452-201ENST00000385020 85 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms