Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SNRPGP14-201ENST00000435400 219 ntBASIC1.24□□□□□ -2.21
CX3CL1P78423 AC245047.8-201ENST00000456455 284 ntBASIC1.24□□□□□ -2.21
CX3CL1P78423 RNU6-1007P-201ENST00000516586 107 ntBASIC1.24□□□□□ -2.21
CX3CL1P78423 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.24□□□□□ -2.21
CX3CL1P78423 AL049861.1-201ENST00000603130 150 ntBASIC1.24□□□□□ -2.21
CX3CL1P78423 BX248123.2-201ENST00000606318 124 ntBASIC1.24□□□□□ -2.21
CX3CL1P78423 uc_338.4-201ENST00000616635 176 ntBASIC1.24□□□□□ -2.21
CX3CL1P78423 7SK.10-201ENST00000621414 298 ntBASIC1.24□□□□□ -2.21
CX3CL1P78423 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CX3CL1P78423 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
CX3CL1P78423 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.23□□□□□ -2.21
CX3CL1P78423 Y_RNA.144-201ENST00000363521 113 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 RNU6-702P-201ENST00000364982 107 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 Y_RNA.416-201ENST00000384014 113 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 Y_RNA.572-201ENST00000384757 98 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.23□□□□□ -2.21
CX3CL1P78423 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
CX3CL1P78423 AC023449.1-201ENST00000454464 154 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 SNORD13-201ENST00000459299 104 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 Y_RNA.638-201ENST00000459374 113 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 MTND1P19-201ENST00000511780 315 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 SNORD111.1-201ENST00000516421 86 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 SNORD53B-201ENST00000577887 78 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 MIR5688-201ENST00000580619 83 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 MIR4298-201ENST00000584380 73 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 AC062037.2-201ENST00000610137 73 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 MIR7843-201ENST00000622274 79 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 AP000648.3-201ENST00000623539 4507 ntBASIC1.23□□□□□ -2.21
CX3CL1P78423 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CX3CL1P78423 Y_RNA.24-201ENST00000362508 103 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 Y_RNA.76-201ENST00000362931 109 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 Y_RNA.193-201ENST00000363979 102 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 RNU6-268P-201ENST00000364174 107 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 Y_RNA.229-201ENST00000364347 113 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 Y_RNA.304-201ENST00000365011 112 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 Y_RNA.350-201ENST00000365409 98 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 Y_RNA.452-201ENST00000384202 108 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 RNU6-463P-201ENST00000384340 107 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 Y_RNA.477-201ENST00000384352 108 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 MIR626-201ENST00000385032 94 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 MIR517C-201ENST00000385103 95 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 MIR764-201ENST00000390811 85 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 AC023790.1-201ENST00000482174 347 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 SNORD116-28-201ENST00000516123 91 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 RNU7-149P-201ENST00000516739 59 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 MIR3149-201ENST00000584629 83 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 AL357312.1-201ENST00000603879 298 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 AL442067.1-201ENST00000613261 223 ntBASIC1.22□□□□□ -2.21
CX3CL1P78423 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CX3CL1P78423 SNORD27-201ENST00000363981 72 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 SNORD38C-201ENST00000384381 69 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 MIR15B-201ENST00000385045 98 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 MIR320A-201ENST00000385302 82 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 MIR1304-201ENST00000408243 91 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.21□□□□□ -2.22
CX3CL1P78423 snoU13.23-201ENST00000458863 104 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.21□□□□□ -2.22
CX3CL1P78423 SNORD77.4-201ENST00000516158 81 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 AC011921.3-201ENST00000605540 361 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 BX284668.6-201ENST00000606899 438 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 AL365265.1-201ENST00000621045 234 ntBASIC1.21□□□□□ -2.22
CX3CL1P78423 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
CX3CL1P78423 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CX3CL1P78423 RNU1-17P-201ENST00000363022 152 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 Y_RNA.242-201ENST00000364473 110 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 RNU6-1138P-201ENST00000365359 106 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 SNORA67.5-201ENST00000391036 107 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 SNORA67.6-201ENST00000391093 99 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 RNU6-947P-201ENST00000516264 106 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 Y_RNA.673-201ENST00000516306 88 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 Y_RNA.680-201ENST00000516441 93 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 SNORA18.7-201ENST00000516910 131 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 SNORA74.3-201ENST00000517108 154 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 AC015712.3-201ENST00000559380 164 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 AC006441.5-201ENST00000612680 209 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.2□□□□□ -2.22
CX3CL1P78423 Y_RNA.20-201ENST00000362479 113 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 Y_RNA.60-201ENST00000362831 98 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 RNU6-653P-201ENST00000363074 106 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 RNU1-42P-201ENST00000364033 160 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 Y_RNA.539-201ENST00000384635 107 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 Y_RNA.587-201ENST00000391210 103 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 MIR1323-201ENST00000408090 73 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 SNORD123-201ENST00000459473 70 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 AC108210.2-201ENST00000503681 201 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.19□□□□□ -2.22
CX3CL1P78423 MIR3128-201ENST00000581957 66 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 AL096861.1-201ENST00000610899 123 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 MIR7974-201ENST00000615835 79 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 AC015726.2-201ENST00000620112 122 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 MIR8065-201ENST00000620577 100 ntBASIC1.19□□□□□ -2.22
CX3CL1P78423 snoU2_19.4-201ENST00000364329 80 ntBASIC1.18□□□□□ -2.22
CX3CL1P78423 RNU6-60P-201ENST00000364792 103 ntBASIC1.18□□□□□ -2.22
CX3CL1P78423 Y_RNA.292-201ENST00000364904 97 ntBASIC1.18□□□□□ -2.22
CX3CL1P78423 Y_RNA.307-201ENST00000365022 117 ntBASIC1.18□□□□□ -2.22
CX3CL1P78423 snosnR66.1-201ENST00000391095 99 ntBASIC1.18□□□□□ -2.22
CX3CL1P78423 RNU6-955P-201ENST00000410497 104 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms