Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNY3P5-201ENST00000384127 102 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 MIR9-2-201ENST00000384838 87 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 MIR516B1-201ENST00000385211 90 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 MIR1265-201ENST00000408444 86 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 RNA5SP118-201ENST00000410385 109 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.22□□□□□ -2.6
RPS28P62857 MTND3P23-201ENST00000431980 347 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 AC073415.1-201ENST00000449240 153 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 SCARNA18B-201ENST00000458806 135 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 RNU7-187P-201ENST00000458985 68 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 SNORD38.3-201ENST00000516599 73 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 RNU6-765P-201ENST00000516916 99 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 MIR4509-3-201ENST00000578671 94 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 MIR548AX-201ENST00000580117 73 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 MIR4509-2-201ENST00000583920 94 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 MIR4509-1-201ENST00000618224 94 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.23□□□□□ -2.61
RPS28P62857 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.23□□□□□ -2.61
RPS28P62857 SNORD113-7-201ENST00000363762 77 ntBASIC-1.23□□□□□ -2.61
RPS28P62857 RNU6-767P-201ENST00000384132 107 ntBASIC-1.23□□□□□ -2.61
RPS28P62857 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.23□□□□□ -2.61
RPS28P62857 MIR625-201ENST00000385047 85 ntBASIC-1.23□□□□□ -2.61
RPS28P62857 BX276092.1-201ENST00000427368 251 ntBASIC-1.23□□□□□ -2.61
RPS28P62857 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.23□□□□□ -2.61
RPS28P62857 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.23□□□□□ -2.61
RPS28P62857 SNORD115-44-201ENST00000365391 82 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 SNORA72.6-201ENST00000384520 129 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 SNORA40.3-201ENST00000390964 122 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 BX295541.1-201ENST00000417774 250 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 CYCSP46-201ENST00000423569 204 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 USMG5P1-201ENST00000425964 177 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 ACA59.1-201ENST00000515966 143 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 SNORA18.6-201ENST00000516792 115 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 RNU6-958P-201ENST00000516995 106 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 AC140658.3-201ENST00000567603 271 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.24□□□□□ -2.61
RPS28P62857 MIR4424-201ENST00000585257 86 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 AC011458.1-201ENST00000604034 617 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 AC109347.2-201ENST00000610220 349 ntBASIC-1.24□□□□□ -2.61
RPS28P62857 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 RNU6-708P-201ENST00000384217 107 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 SNORD37.1-201ENST00000390968 65 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 RNA5SP25-201ENST00000410815 110 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.25□□□□□ -2.61
RPS28P62857 AL033528.1-201ENST00000453780 140 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 AC010655.3-201ENST00000478818 450 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 RPL7P42-201ENST00000481005 679 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.25□□□□□ -2.61
RPS28P62857 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.25□□□□□ -2.61
RPS28P62857 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 SNORA25.13-201ENST00000516395 103 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 ELOCP32-201ENST00000548625 324 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 AL133255.1-201ENST00000606374 441 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 MIR6851-201ENST00000617060 67 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 AC073534.2-201ENST00000620377 381 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 AC099654.12-201ENST00000639868 649 ntBASIC-1.25□□□□□ -2.61
RPS28P62857 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 RNU6-602P-201ENST00000411155 105 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 HMGN1P33-201ENST00000432945 451 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 AL031667.1-201ENST00000440222 725 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 RNU2-11P-201ENST00000459191 187 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.26□□□□□ -2.61
RPS28P62857 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 AP003072.1-201ENST00000531740 145 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 MIR4306-201ENST00000583390 91 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 POLR3GP1-201ENST00000594073 261 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 AC073869.9-201ENST00000641610 120 ntBASIC-1.26□□□□□ -2.61
RPS28P62857 SNORD115-30-201ENST00000364117 82 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.27□□□□□ -2.61
RPS28P62857 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 AC090616.2-202ENST00000584248 222 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 MIR6779-201ENST00000617283 64 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 MTND5P18-201ENST00000445624 1801 ntBASIC-1.27□□□□□ -2.61
RPS28P62857 RNA5SP192-201ENST00000364404 120 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 SNORD114-15-201ENST00000364687 72 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 SNORA69-201ENST00000383895 132 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 MIR587-201ENST00000384845 96 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 SNORD12C-201ENST00000386307 89 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 MT-TY-201ENST00000387409 66 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 RNU6-913P-201ENST00000390913 95 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 MTND5P34-201ENST00000568888 325 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 MIR3115-201ENST00000577915 68 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.28□□□□□ -2.61
RPS28P62857 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms