Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SNORA4-201ENST00000584302 138 ntBASIC1.44□□□□□ -2.18
RHBDL3P58872 AL096861.1-201ENST00000610899 123 ntBASIC1.44□□□□□ -2.18
RHBDL3P58872 AL391903.3-201ENST00000612158 163 ntBASIC1.44□□□□□ -2.18
RHBDL3P58872 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
RHBDL3P58872 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RHBDL3P58872 Y_RNA.214-201ENST00000364201 112 ntBASIC1.43□□□□□ -2.18
RHBDL3P58872 RNU6-1067P-201ENST00000384752 107 ntBASIC1.43□□□□□ -2.18
RHBDL3P58872 SNORA26.5-201ENST00000391215 123 ntBASIC1.43□□□□□ -2.18
RHBDL3P58872 AC005534.2-201ENST00000431047 433 ntBASIC1.43□□□□□ -2.18
RHBDL3P58872 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.43□□□□□ -2.18
RHBDL3P58872 RPS23P4-201ENST00000487908 423 ntBASIC1.43□□□□□ -2.18
RHBDL3P58872 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.43□□□□□ -2.18
RHBDL3P58872 SNORD79.1-201ENST00000516069 84 ntBASIC1.43□□□□□ -2.18
RHBDL3P58872 SNORA18.7-201ENST00000516910 131 ntBASIC1.43□□□□□ -2.18
RHBDL3P58872 AC008507.4-201ENST00000585464 127 ntBASIC1.43□□□□□ -2.18
RHBDL3P58872 RNU6-1048P-201ENST00000364054 107 ntBASIC1.42□□□□□ -2.18
RHBDL3P58872 SNORA33.2-201ENST00000365413 134 ntBASIC1.42□□□□□ -2.18
RHBDL3P58872 MIR19B1-201ENST00000384829 87 ntBASIC1.42□□□□□ -2.18
RHBDL3P58872 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.42□□□□□ -2.18
RHBDL3P58872 ELOCP20-201ENST00000422460 345 ntBASIC1.42□□□□□ -2.18
RHBDL3P58872 SNORD123-201ENST00000459473 70 ntBASIC1.42□□□□□ -2.18
RHBDL3P58872 COX6CP14-201ENST00000469580 174 ntBASIC1.42□□□□□ -2.18
RHBDL3P58872 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.42□□□□□ -2.18
RHBDL3P58872 AC012676.2-201ENST00000619258 186 ntBASIC1.42□□□□□ -2.18
RHBDL3P58872 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
RHBDL3P58872 Y_RNA.422-201ENST00000384054 114 ntBASIC1.41□□□□□ -2.18
RHBDL3P58872 RNU2-14P-201ENST00000411053 191 ntBASIC1.41□□□□□ -2.18
RHBDL3P58872 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.41□□□□□ -2.18
RHBDL3P58872 MRPS35P2-201ENST00000508242 191 ntBASIC1.41□□□□□ -2.18
RHBDL3P58872 RNU6-830P-201ENST00000516353 107 ntBASIC1.41□□□□□ -2.18
RHBDL3P58872 MIR4764-201ENST00000580680 88 ntBASIC1.41□□□□□ -2.18
RHBDL3P58872 MIR6767-201ENST00000637302 66 ntBASIC1.41□□□□□ -2.18
RHBDL3P58872 AC134026.1-201ENST00000623249 2239 ntBASIC1.41□□□□□ -2.18
RHBDL3P58872 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RHBDL3P58872 Y_RNA.14-201ENST00000362415 103 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 Y_RNA.122-201ENST00000363331 96 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 RNU6-1227P-201ENST00000383981 107 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 RNU6-763P-201ENST00000390865 106 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 RNA5SP496-201ENST00000391240 109 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 RNU6-121P-201ENST00000410525 99 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 AC113618.1-201ENST00000416747 285 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 AL731563.1-201ENST00000442202 214 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 NDUFA4P2-201ENST00000489989 244 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 AP003733.2-201ENST00000529409 171 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 PRELID3BP2-201ENST00000605362 201 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 AC013791.1-201ENST00000616619 62 ntBASIC1.4□□□□□ -2.19
RHBDL3P58872 Y_RNA.118-201ENST00000363300 101 ntBASIC1.39□□□□□ -2.19
RHBDL3P58872 Y_RNA.216-201ENST00000364205 93 ntBASIC1.39□□□□□ -2.19
RHBDL3P58872 Y_RNA.370-201ENST00000365589 108 ntBASIC1.39□□□□□ -2.19
RHBDL3P58872 MIR200A-201ENST00000384875 90 ntBASIC1.39□□□□□ -2.19
RHBDL3P58872 MIR489-201ENST00000384923 84 ntBASIC1.39□□□□□ -2.19
RHBDL3P58872 MTCYBP6-201ENST00000441810 138 ntBASIC1.39□□□□□ -2.19
RHBDL3P58872 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
RHBDL3P58872 HSPE1P19-201ENST00000603327 295 ntBASIC1.39□□□□□ -2.19
RHBDL3P58872 Pinc.1-201ENST00000616452 154 ntBASIC1.39□□□□□ -2.19
RHBDL3P58872 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RHBDL3P58872 MIR367-201ENST00000362299 68 ntBASIC1.38□□□□□ -2.19
RHBDL3P58872 RNU6-1272P-201ENST00000362776 107 ntBASIC1.38□□□□□ -2.19
RHBDL3P58872 Y_RNA.105-201ENST00000363182 111 ntBASIC1.38□□□□□ -2.19
RHBDL3P58872 RNU6-985P-201ENST00000410182 104 ntBASIC1.38□□□□□ -2.19
RHBDL3P58872 RNU7-90P-201ENST00000459216 62 ntBASIC1.38□□□□□ -2.19
RHBDL3P58872 AC091959.1-201ENST00000495857 238 ntBASIC1.38□□□□□ -2.19
RHBDL3P58872 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.38□□□□□ -2.19
RHBDL3P58872 MIR3192-201ENST00000584920 77 ntBASIC1.38□□□□□ -2.19
RHBDL3P58872 AL442644.1-201ENST00000454390 3105 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 MIR103A2-201ENST00000362154 78 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 snoU2_19.2-201ENST00000363024 80 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 RNA5SP264-201ENST00000363115 107 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 SNORD114-27-201ENST00000363766 70 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 SNORA1.2-201ENST00000365189 134 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 Y_RNA.541-201ENST00000384640 113 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 SNORD11-201ENST00000459124 84 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 SNORA27.4-201ENST00000516650 95 ntBASIC1.37□□□□□ -2.19
RHBDL3P58872 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.37□□□□□ -2.19
RHBDL3P58872 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RHBDL3P58872 RNU7-21P-201ENST00000459430 62 ntBASIC1.36□□□□□ -2.19
RHBDL3P58872 snoU13.18-201ENST00000459483 104 ntBASIC1.36□□□□□ -2.19
RHBDL3P58872 MIR5692C2-201ENST00000577959 77 ntBASIC1.36□□□□□ -2.19
RHBDL3P58872 MIR4724-201ENST00000579485 89 ntBASIC1.36□□□□□ -2.19
RHBDL3P58872 MIR5688-201ENST00000580619 83 ntBASIC1.36□□□□□ -2.19
RHBDL3P58872 MIR4661-201ENST00000582720 75 ntBASIC1.36□□□□□ -2.19
RHBDL3P58872 AC006441.5-201ENST00000612680 209 ntBASIC1.36□□□□□ -2.19
RHBDL3P58872 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RHBDL3P58872 Y_RNA.153-201ENST00000363615 91 ntBASIC1.35□□□□□ -2.19
RHBDL3P58872 RNU6-268P-201ENST00000364174 107 ntBASIC1.35□□□□□ -2.19
RHBDL3P58872 SNORD114-24-201ENST00000365029 72 ntBASIC1.35□□□□□ -2.19
RHBDL3P58872 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
RHBDL3P58872 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.35□□□□□ -2.19
RHBDL3P58872 RNU6-126P-201ENST00000516685 103 ntBASIC1.35□□□□□ -2.19
RHBDL3P58872 RNU11-2P-201ENST00000516898 142 ntBASIC1.35□□□□□ -2.19
RHBDL3P58872 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.35□□□□□ -2.19
RHBDL3P58872 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
RHBDL3P58872 AL391516.1-201ENST00000554380 2449 ntBASIC1.35□□□□□ -2.19
RHBDL3P58872 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RHBDL3P58872 MIR1278-201ENST00000408753 81 ntBASIC1.34□□□□□ -2.19
RHBDL3P58872 RPL21P38-201ENST00000418090 167 ntBASIC1.34□□□□□ -2.19
RHBDL3P58872 SNRPGP14-201ENST00000435400 219 ntBASIC1.34□□□□□ -2.19
RHBDL3P58872 Y_RNA.637-201ENST00000459424 114 ntBASIC1.34□□□□□ -2.19
RHBDL3P58872 AC098869.1-201ENST00000481627 292 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms