Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Y_RNA.590-201ENST00000410140 107 ntBASIC1.37□□□□□ -2.19
CDH11P55287 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
CDH11P55287 SNRPGP14-201ENST00000435400 219 ntBASIC1.37□□□□□ -2.19
CDH11P55287 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
CDH11P55287 HSPE1P24-201ENST00000450782 238 ntBASIC1.37□□□□□ -2.19
CDH11P55287 AC093850.1-201ENST00000454121 251 ntBASIC1.37□□□□□ -2.19
CDH11P55287 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.37□□□□□ -2.19
CDH11P55287 AC114811.1-201ENST00000507207 168 ntBASIC1.37□□□□□ -2.19
CDH11P55287 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
CDH11P55287 Y_RNA.676-201ENST00000516393 96 ntBASIC1.37□□□□□ -2.19
CDH11P55287 RPL23AP91-201ENST00000569211 455 ntBASIC1.37□□□□□ -2.19
CDH11P55287 MIR4778-201ENST00000577635 80 ntBASIC1.37□□□□□ -2.19
CDH11P55287 AL512598.1-201ENST00000610158 273 ntBASIC1.37□□□□□ -2.19
CDH11P55287 AL442067.1-201ENST00000613261 223 ntBASIC1.37□□□□□ -2.19
CDH11P55287 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDH11P55287 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDH11P55287 Y_RNA.54-201ENST00000362766 105 ntBASIC1.36□□□□□ -2.19
CDH11P55287 Y_RNA.60-201ENST00000362831 98 ntBASIC1.36□□□□□ -2.19
CDH11P55287 Y_RNA.293-201ENST00000364908 93 ntBASIC1.36□□□□□ -2.19
CDH11P55287 RNU6-131P-201ENST00000391144 107 ntBASIC1.36□□□□□ -2.19
CDH11P55287 PIGPP3-201ENST00000425307 415 ntBASIC1.36□□□□□ -2.19
CDH11P55287 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
CDH11P55287 SNORD45.4-201ENST00000516629 73 ntBASIC1.36□□□□□ -2.19
CDH11P55287 DNAJC19P9-201ENST00000555084 351 ntBASIC1.36□□□□□ -2.19
CDH11P55287 Y_RNA.802-201ENST00000614892 130 ntBASIC1.36□□□□□ -2.19
CDH11P55287 AL365265.1-201ENST00000621045 234 ntBASIC1.36□□□□□ -2.19
CDH11P55287 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.36□□□□□ -2.19
CDH11P55287 SNORD27-201ENST00000363981 72 ntBASIC1.35□□□□□ -2.19
CDH11P55287 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
CDH11P55287 RNY1-201ENST00000364228 113 ntBASIC1.35□□□□□ -2.19
CDH11P55287 Y_RNA.269-201ENST00000364685 89 ntBASIC1.35□□□□□ -2.19
CDH11P55287 Y_RNA.292-201ENST00000364904 97 ntBASIC1.35□□□□□ -2.19
CDH11P55287 RNY4P28-201ENST00000365281 93 ntBASIC1.35□□□□□ -2.19
CDH11P55287 MIR526A1-201ENST00000384897 85 ntBASIC1.35□□□□□ -2.19
CDH11P55287 MT-TG-201ENST00000387429 68 ntBASIC1.35□□□□□ -2.19
CDH11P55287 RNA5SP496-201ENST00000391240 109 ntBASIC1.35□□□□□ -2.19
CDH11P55287 MLLT10P1-201ENST00000418346 262 ntBASIC1.35□□□□□ -2.19
CDH11P55287 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH11P55287 AC245517.4-201ENST00000448601 281 ntBASIC1.35□□□□□ -2.19
CDH11P55287 RNU6-917P-201ENST00000516294 104 ntBASIC1.35□□□□□ -2.19
CDH11P55287 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH11P55287 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
CDH11P55287 MIR4724-201ENST00000579485 89 ntBASIC1.35□□□□□ -2.19
CDH11P55287 AC008507.4-201ENST00000585464 127 ntBASIC1.35□□□□□ -2.19
CDH11P55287 AC087685.1-201ENST00000587507 141 ntBASIC1.35□□□□□ -2.19
CDH11P55287 AL365434.2-201ENST00000607979 234 ntBASIC1.35□□□□□ -2.19
CDH11P55287 JPX_2.1-201ENST00000614161 69 ntBASIC1.35□□□□□ -2.19
CDH11P55287 MIR8063-201ENST00000621930 81 ntBASIC1.35□□□□□ -2.19
CDH11P55287 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDH11P55287 RNU6-199P-201ENST00000362954 107 ntBASIC1.34□□□□□ -2.19
CDH11P55287 RNA5SP259-201ENST00000365541 109 ntBASIC1.34□□□□□ -2.19
CDH11P55287 RNU6-163P-201ENST00000384396 106 ntBASIC1.34□□□□□ -2.19
CDH11P55287 SNORA8.3-201ENST00000384679 139 ntBASIC1.34□□□□□ -2.19
CDH11P55287 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
CDH11P55287 MIR891A-201ENST00000401237 79 ntBASIC1.34□□□□□ -2.19
CDH11P55287 AP1B1P2-201ENST00000416196 106 ntBASIC1.34□□□□□ -2.19
CDH11P55287 RPS27P16-201ENST00000425758 201 ntBASIC1.34□□□□□ -2.19
CDH11P55287 AC245047.8-201ENST00000456455 284 ntBASIC1.34□□□□□ -2.19
CDH11P55287 AC092991.1-201ENST00000477176 376 ntBASIC1.34□□□□□ -2.19
CDH11P55287 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
CDH11P55287 RNU6-111P-201ENST00000517179 105 ntBASIC1.34□□□□□ -2.19
CDH11P55287 MIR4422-201ENST00000581938 83 ntBASIC1.34□□□□□ -2.19
CDH11P55287 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
CDH11P55287 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
CDH11P55287 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.34□□□□□ -2.19
CDH11P55287 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
CDH11P55287 Y_RNA.24-201ENST00000362508 103 ntBASIC1.33□□□□□ -2.2
CDH11P55287 snoU2_19.4-201ENST00000364329 80 ntBASIC1.33□□□□□ -2.2
CDH11P55287 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
CDH11P55287 SNORD72-201ENST00000390994 80 ntBASIC1.33□□□□□ -2.2
CDH11P55287 MIR1298-201ENST00000408783 112 ntBASIC1.33□□□□□ -2.2
CDH11P55287 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
CDH11P55287 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
CDH11P55287 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.33□□□□□ -2.2
CDH11P55287 AC079140.2-201ENST00000506193 142 ntBASIC1.33□□□□□ -2.2
CDH11P55287 Y_RNA.679-201ENST00000516416 91 ntBASIC1.33□□□□□ -2.2
CDH11P55287 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
CDH11P55287 uc_338.4-201ENST00000616635 176 ntBASIC1.33□□□□□ -2.2
CDH11P55287 AC106754.2-201ENST00000623006 233 ntBASIC1.33□□□□□ -2.2
CDH11P55287 MIR367-201ENST00000362299 68 ntBASIC1.32□□□□□ -2.2
CDH11P55287 Y_RNA.4-201ENST00000362333 112 ntBASIC1.32□□□□□ -2.2
CDH11P55287 Y_RNA.164-201ENST00000363709 102 ntBASIC1.32□□□□□ -2.2
CDH11P55287 Y_RNA.229-201ENST00000364347 113 ntBASIC1.32□□□□□ -2.2
CDH11P55287 snoU2-30.1-201ENST00000365012 70 ntBASIC1.32□□□□□ -2.2
CDH11P55287 Y_RNA.336-201ENST00000365307 109 ntBASIC1.32□□□□□ -2.2
CDH11P55287 SNORA2.2-201ENST00000365473 135 ntBASIC1.32□□□□□ -2.2
CDH11P55287 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.32□□□□□ -2.2
CDH11P55287 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
CDH11P55287 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH11P55287 COX6CP14-201ENST00000469580 174 ntBASIC1.32□□□□□ -2.2
CDH11P55287 RNA5SP445-201ENST00000515889 115 ntBASIC1.32□□□□□ -2.2
CDH11P55287 SCARNA8-201ENST00000515924 131 ntBASIC1.32□□□□□ -2.2
CDH11P55287 Y_RNA.714-201ENST00000517065 90 ntBASIC1.32□□□□□ -2.2
CDH11P55287 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDH11P55287 RNU6-1084P-201ENST00000362498 107 ntBASIC1.31□□□□□ -2.2
CDH11P55287 SNORD33-201ENST00000362761 85 ntBASIC1.31□□□□□ -2.2
CDH11P55287 Y_RNA.65-201ENST00000362846 100 ntBASIC1.31□□□□□ -2.2
CDH11P55287 SNORA20.1-201ENST00000364790 130 ntBASIC1.31□□□□□ -2.2
CDH11P55287 RNU6-1138P-201ENST00000365359 106 ntBASIC1.31□□□□□ -2.2
CDH11P55287 Y_RNA.401-201ENST00000383965 117 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms