| KCNQ1 | P51787 | Y_RNA.294-201 | ENST00000364916 | 102 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU1-51P-201 | ENST00000365345 | 176 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.353-201 | ENST00000365440 | 108 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU1-148P-201 | ENST00000384472 | 162 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.563-201 | ENST00000384707 | 108 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR522-201 | ENST00000385071 | 87 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR624-201 | ENST00000385217 | 97 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU7-107P-201 | ENST00000459121 | 61 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AC026271.5-201 | ENST00000577873 | 130 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AC087685.1-201 | ENST00000587507 | 141 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL359881.1-201 | ENST00000602916 | 267 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AC022217.4-201 | ENST00000604389 | 163 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL160408.5-201 | ENST00000607759 | 526 nt | TSL 4 BASIC | 2.4 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Z82195.2-201 | ENST00000612348 | 18351 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | CCSAP-202 | ENST00000366686 | 4399 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR378A-201 | ENST00000362177 | 66 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU6-215P-201 | ENST00000365169 | 102 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SNORD24-201 | ENST00000383884 | 75 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL135790.1-201 | ENST00000427161 | 157 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | FTH1P12-201 | ENST00000432137 | 551 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | snoU13.18-201 | ENST00000459483 | 104 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL049830.1-201 | ENST00000468034 | 425 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU6-504P-201 | ENST00000516568 | 104 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNA5SP402-201 | ENST00000517148 | 110 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR5007-201 | ENST00000583098 | 95 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Hammerhead_HH9.1-201 | ENST00000616606 | 77 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | NAALADL2-203 | ENST00000454872 | 9865 nt | APPRIS P1 TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AKAP9-203 | ENST00000359028 | 12247 nt | APPRIS ALT2 TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU6-888P-201 | ENST00000363010 | 101 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SNORA1-201 | ENST00000384107 | 130 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SNORD61-201 | ENST00000384252 | 73 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SNORD20-201 | ENST00000384550 | 80 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SNORA11.4-201 | ENST00000408823 | 129 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNA5SP127-201 | ENST00000411051 | 133 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL606517.2-201 | ENST00000442855 | 241 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL354733.1-201 | ENST00000458016 | 476 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AC122707.1-201 | ENST00000502882 | 219 nt | TSL 2 BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.712-201 | ENST00000517011 | 92 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.757-201 | ENST00000578934 | 114 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR3121-201 | ENST00000579680 | 77 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR4762-201 | ENST00000585261 | 75 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL137847.3-201 | ENST00000611521 | 109 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU1-58P-201 | ENST00000362413 | 163 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.52-201 | ENST00000362760 | 96 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | U8.5-201 | ENST00000364528 | 136 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.525-201 | ENST00000384570 | 113 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR548A2-201 | ENST00000384956 | 97 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR29C-201 | ENST00000385231 | 88 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR891A-201 | ENST00000401237 | 79 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL603914.1-201 | ENST00000401964 | 204 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL158823.1-201 | ENST00000418441 | 478 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL136985.1-201 | ENST00000424592 | 395 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU7-26P-201 | ENST00000458980 | 63 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RN7SKP179-201 | ENST00000516126 | 217 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.692-201 | ENST00000516627 | 105 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AC090049.2-201 | ENST00000550377 | 109 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AC005786.1-201 | ENST00000588553 | 154 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RGPD6-201 | ENST00000329516 | 7165 nt | APPRIS P1 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AC092881.1-201 | ENST00000638218 | 2733 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU6-834P-201 | ENST00000362367 | 110 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SNORD115-3-201 | ENST00000363100 | 82 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR221-201 | ENST00000385135 | 110 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MLLT10P1-201 | ENST00000418346 | 262 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.666-201 | ENST00000516187 | 112 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SNORA18.4-201 | ENST00000516440 | 124 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | FANCD2-213 | ENST00000625535 | 117 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | LRRD1-203 | ENST00000430130 | 2661 nt | APPRIS P1 TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SLCO1B3-202 | ENST00000381545 | 2805 nt | APPRIS P1 TSL 2 BASIC | 2.36 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | NEB-203 | ENST00000397345 | 26202 nt | APPRIS ALT2 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | NEB-209 | ENST00000427231 | 26202 nt | APPRIS ALT2 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | OGN-201 | ENST00000262551 | 2971 nt | APPRIS P1 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU6-235P-201 | ENST00000362644 | 107 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SNORA38-201 | ENST00000363946 | 132 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.242-201 | ENST00000364473 | 110 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU6-1292P-201 | ENST00000383856 | 107 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | BX510359.4-201 | ENST00000423750 | 193 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | AL158147.1-201 | ENST00000443970 | 75 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNA5SP137-201 | ENST00000516833 | 135 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.714-201 | ENST00000517065 | 90 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR3129-201 | ENST00000581095 | 76 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | CEP57L1-213 | ENST00000520883 | 2055 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU6-508P-201 | ENST00000363231 | 103 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.114-201 | ENST00000363265 | 113 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SUMO1P4-201 | ENST00000429430 | 302 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | SNORA31.11-201 | ENST00000516528 | 139 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | Y_RNA.690-201 | ENST00000516603 | 95 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU6-1270P-201 | ENST00000517128 | 108 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | RNU1-104P-201 | ENST00000517280 | 175 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | MIR6766-201 | ENST00000622641 | 72 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| KCNQ1 | P51787 | GPR22-201 | ENST00000304402 | 2942 nt | APPRIS P1 TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | RNY1P10-201 | ENST00000363268 | 113 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | RNU6-309P-201 | ENST00000364573 | 106 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | MIR518F-201 | ENST00000384973 | 87 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | RNA5SP109-201 | ENST00000391010 | 116 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | BTF3P4-201 | ENST00000418852 | 495 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | AC245047.3-201 | ENST00000429428 | 127 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | SNRPGP14-201 | ENST00000435400 | 219 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | SNRPGP13-201 | ENST00000442212 | 177 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | TRMT112P2-201 | ENST00000512910 | 132 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| KCNQ1 | P51787 | RNU6-772P-201 | ENST00000516042 | 105 nt | BASIC | 2.33 | □□□□□ -2.04 | | |