Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 Y_RNA.253-201ENST00000364562 112 ntBASIC2.19□□□□□ -2.06
CLK3P49761 SNORD61-201ENST00000384252 73 ntBASIC2.19□□□□□ -2.06
CLK3P49761 RNU6-1186P-201ENST00000410429 97 ntBASIC2.19□□□□□ -2.06
CLK3P49761 AL031737.1-201ENST00000450125 223 ntBASIC2.19□□□□□ -2.06
CLK3P49761 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.19□□□□□ -2.06
CLK3P49761 RN7SL636P-201ENST00000497504 294 ntBASIC2.19□□□□□ -2.06
CLK3P49761 AC234781.5-201ENST00000508429 271 ntBASIC2.19□□□□□ -2.06
CLK3P49761 AC011406.1-201ENST00000512440 370 ntBASIC2.19□□□□□ -2.06
CLK3P49761 RNU7-128P-201ENST00000517247 62 ntBASIC2.19□□□□□ -2.06
CLK3P49761 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.19□□□□□ -2.06
CLK3P49761 IGKV1-22-201ENST00000524313 326 ntBASIC2.19□□□□□ -2.06
CLK3P49761 AL358944.1-201ENST00000528537 144 ntBASIC2.19□□□□□ -2.06
CLK3P49761 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
CLK3P49761 MIR4448-201ENST00000584360 86 ntBASIC2.19□□□□□ -2.06
CLK3P49761 AC006254.2-201ENST00000603259 279 ntBASIC2.19□□□□□ -2.06
CLK3P49761 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.19□□□□□ -2.06
CLK3P49761 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.19□□□□□ -2.06
CLK3P49761 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.19□□□□□ -2.06
CLK3P49761 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
CLK3P49761 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CLK3P49761 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLK3P49761 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLK3P49761 RNU6-32P-201ENST00000383948 107 ntBASIC2.18□□□□□ -2.06
CLK3P49761 RNU6-13P-201ENST00000384248 107 ntBASIC2.18□□□□□ -2.06
CLK3P49761 Y_RNA.495-201ENST00000384435 112 ntBASIC2.18□□□□□ -2.06
CLK3P49761 RNU6-12P-201ENST00000384604 107 ntBASIC2.18□□□□□ -2.06
CLK3P49761 RNU6-41P-201ENST00000384741 107 ntBASIC2.18□□□□□ -2.06
CLK3P49761 HMGN2P39-201ENST00000398005 273 ntBASIC2.18□□□□□ -2.06
CLK3P49761 AL353689.1-201ENST00000438895 199 ntBASIC2.18□□□□□ -2.06
CLK3P49761 AC233266.1-201ENST00000454518 96 ntBASIC2.18□□□□□ -2.06
CLK3P49761 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
CLK3P49761 RNU6-412P-201ENST00000516434 106 ntBASIC2.18□□□□□ -2.06
CLK3P49761 AC008507.4-201ENST00000585464 127 ntBASIC2.18□□□□□ -2.06
CLK3P49761 AC242852.1-201ENST00000612151 96 ntBASIC2.18□□□□□ -2.06
CLK3P49761 AL359075.3-201ENST00000613288 217 ntBASIC2.18□□□□□ -2.06
CLK3P49761 AC244015.1-201ENST00000622301 99 ntBASIC2.18□□□□□ -2.06
CLK3P49761 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLK3P49761 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLK3P49761 Y_RNA.116-201ENST00000363292 103 ntBASIC2.17□□□□□ -2.06
CLK3P49761 Y_RNA.281-201ENST00000364774 94 ntBASIC2.17□□□□□ -2.06
CLK3P49761 SNORA12.1-201ENST00000390873 148 ntBASIC2.17□□□□□ -2.06
CLK3P49761 SNORD72-201ENST00000390994 80 ntBASIC2.17□□□□□ -2.06
CLK3P49761 SNORD23.1-201ENST00000408212 104 ntBASIC2.17□□□□□ -2.06
CLK3P49761 MIR1263-201ENST00000408324 86 ntBASIC2.17□□□□□ -2.06
CLK3P49761 RNA5SP136-201ENST00000410906 107 ntBASIC2.17□□□□□ -2.06
CLK3P49761 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.17□□□□□ -2.06
CLK3P49761 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.17□□□□□ -2.06
CLK3P49761 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
CLK3P49761 RNU6-1291P-201ENST00000516591 104 ntBASIC2.17□□□□□ -2.06
CLK3P49761 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
CLK3P49761 RNU6-341P-201ENST00000516973 96 ntBASIC2.17□□□□□ -2.06
CLK3P49761 Y_RNA.714-201ENST00000517065 90 ntBASIC2.17□□□□□ -2.06
CLK3P49761 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.17□□□□□ -2.06
CLK3P49761 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.17□□□□□ -2.06
CLK3P49761 MIR6852-201ENST00000621699 66 ntBASIC2.17□□□□□ -2.06
CLK3P49761 MIR6079-201ENST00000635807 62 ntBASIC2.17□□□□□ -2.06
CLK3P49761 AC245060.5-201ENST00000610778 3293 ntBASIC2.17□□□□□ -2.06
CLK3P49761 SNORD114-6-201ENST00000364393 72 ntBASIC2.16□□□□□ -2.06
CLK3P49761 Y_RNA.500-201ENST00000384466 111 ntBASIC2.16□□□□□ -2.06
CLK3P49761 Y_RNA.528-201ENST00000384575 108 ntBASIC2.16□□□□□ -2.06
CLK3P49761 MIR518A2-201ENST00000384966 87 ntBASIC2.16□□□□□ -2.06
CLK3P49761 RNU1-131P-201ENST00000458943 161 ntBASIC2.16□□□□□ -2.06
CLK3P49761 RPS29P24-201ENST00000486345 171 ntBASIC2.16□□□□□ -2.06
CLK3P49761 RNU6-1149P-201ENST00000516810 97 ntBASIC2.16□□□□□ -2.06
CLK3P49761 RNU6-1270P-201ENST00000517128 108 ntBASIC2.16□□□□□ -2.06
CLK3P49761 AC103810.6-201ENST00000606708 136 ntBASIC2.16□□□□□ -2.06
CLK3P49761 AL353149.1-201ENST00000610667 244 ntBASIC2.16□□□□□ -2.06
CLK3P49761 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.16□□□□□ -2.06
CLK3P49761 MIR450A1-201ENST00000362262 91 ntBASIC2.15□□□□□ -2.07
CLK3P49761 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
CLK3P49761 RNU1-58P-201ENST00000362413 163 ntBASIC2.15□□□□□ -2.07
CLK3P49761 RNU6-106P-201ENST00000384405 107 ntBASIC2.15□□□□□ -2.07
CLK3P49761 MIR570-201ENST00000384917 97 ntBASIC2.15□□□□□ -2.07
CLK3P49761 MIR548A2-201ENST00000384956 97 ntBASIC2.15□□□□□ -2.07
CLK3P49761 SNORD77.3-201ENST00000391113 65 ntBASIC2.15□□□□□ -2.07
CLK3P49761 CALM2P4-201ENST00000430810 426 ntBASIC2.15□□□□□ -2.07
CLK3P49761 SNRPGP13-201ENST00000442212 177 ntBASIC2.15□□□□□ -2.07
CLK3P49761 RNU6-693P-201ENST00000516134 107 ntBASIC2.15□□□□□ -2.07
CLK3P49761 Y_RNA.666-201ENST00000516187 112 ntBASIC2.15□□□□□ -2.07
CLK3P49761 SCARNA15-202ENST00000516881 127 ntBASIC2.15□□□□□ -2.07
CLK3P49761 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
CLK3P49761 MIR4529-201ENST00000578110 78 ntBASIC2.15□□□□□ -2.07
CLK3P49761 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.15□□□□□ -2.07
CLK3P49761 uc_338.28-201ENST00000612082 187 ntBASIC2.15□□□□□ -2.07
CLK3P49761 MIR338-201ENST00000636369 67 ntBASIC2.15□□□□□ -2.07
CLK3P49761 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLK3P49761 ZNF658B-202ENST00000615961 3375 ntBASIC2.15□□□□□ -2.07
CLK3P49761 MIR126-201ENST00000362291 85 ntBASIC2.14□□□□□ -2.07
CLK3P49761 RNU6-23P-201ENST00000363283 107 ntBASIC2.14□□□□□ -2.07
CLK3P49761 Y_RNA.267-201ENST00000364679 109 ntBASIC2.14□□□□□ -2.07
CLK3P49761 RNA5SP467-201ENST00000391274 118 ntBASIC2.14□□□□□ -2.07
CLK3P49761 BX510359.4-201ENST00000423750 193 ntBASIC2.14□□□□□ -2.07
CLK3P49761 FTH1P12-201ENST00000432137 551 ntBASIC2.14□□□□□ -2.07
CLK3P49761 COX6CP6-201ENST00000490840 228 ntBASIC2.14□□□□□ -2.07
CLK3P49761 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.14□□□□□ -2.07
CLK3P49761 RNU6-1041P-201ENST00000516254 102 ntBASIC2.14□□□□□ -2.07
CLK3P49761 RNU1-142P-201ENST00000516682 145 ntBASIC2.14□□□□□ -2.07
CLK3P49761 MIR514B-201ENST00000516774 80 ntBASIC2.14□□□□□ -2.07
CLK3P49761 AC007012.1-201ENST00000567192 175 ntBASIC2.14□□□□□ -2.07
CLK3P49761 MIR4435-1-201ENST00000582552 80 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms