Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU6-268P-201ENST00000364174 107 ntBASIC0.49□□□□□ -2.33
CASP4P49662 RNU1-115P-201ENST00000365329 160 ntBASIC0.49□□□□□ -2.33
CASP4P49662 RNU6-396P-201ENST00000365369 105 ntBASIC0.49□□□□□ -2.33
CASP4P49662 Y_RNA.458-201ENST00000384240 102 ntBASIC0.49□□□□□ -2.33
CASP4P49662 SNORA51.10-201ENST00000384418 136 ntBASIC0.49□□□□□ -2.33
CASP4P49662 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
CASP4P49662 U8.17-201ENST00000391292 132 ntBASIC0.49□□□□□ -2.33
CASP4P49662 RBMX2P4-201ENST00000441256 376 ntBASIC0.49□□□□□ -2.33
CASP4P49662 SNORA40.14-201ENST00000516543 86 ntBASIC0.49□□□□□ -2.33
CASP4P49662 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
CASP4P49662 MIR6513-201ENST00000621188 64 ntBASIC0.49□□□□□ -2.33
CASP4P49662 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CASP4P49662 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.48□□□□□ -2.33
CASP4P49662 MIR1-1-201ENST00000362147 71 ntBASIC0.48□□□□□ -2.33
CASP4P49662 Y_RNA.70-201ENST00000362886 110 ntBASIC0.48□□□□□ -2.33
CASP4P49662 RNU6-674P-201ENST00000363831 107 ntBASIC0.48□□□□□ -2.33
CASP4P49662 SNORA1.2-201ENST00000365189 134 ntBASIC0.48□□□□□ -2.33
CASP4P49662 SNORD63-201ENST00000384262 68 ntBASIC0.48□□□□□ -2.33
CASP4P49662 Y_RNA.526-201ENST00000384572 110 ntBASIC0.48□□□□□ -2.33
CASP4P49662 Y_RNA.537-201ENST00000384626 109 ntBASIC0.48□□□□□ -2.33
CASP4P49662 Y_RNA.551-201ENST00000384661 102 ntBASIC0.48□□□□□ -2.33
CASP4P49662 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
CASP4P49662 AC244098.3-201ENST00000424803 96 ntBASIC0.48□□□□□ -2.33
CASP4P49662 RNU6-437P-201ENST00000459408 95 ntBASIC0.48□□□□□ -2.33
CASP4P49662 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
CASP4P49662 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
CASP4P49662 MIR4300-201ENST00000581016 96 ntBASIC0.48□□□□□ -2.33
CASP4P49662 UBE2V2P2-201ENST00000587677 504 ntBASIC0.48□□□□□ -2.33
CASP4P49662 AC104695.3-201ENST00000604052 296 ntBASIC0.48□□□□□ -2.33
CASP4P49662 AL132765.2-201ENST00000610812 351 ntBASIC0.48□□□□□ -2.33
CASP4P49662 AC084781.2-201ENST00000615568 161 ntBASIC0.48□□□□□ -2.33
CASP4P49662 Y_RNA.252-201ENST00000364556 101 ntBASIC0.47□□□□□ -2.33
CASP4P49662 Y_RNA.376-201ENST00000365638 108 ntBASIC0.47□□□□□ -2.33
CASP4P49662 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
CASP4P49662 Y_RNA.439-201ENST00000384119 94 ntBASIC0.47□□□□□ -2.33
CASP4P49662 RNU6-21P-201ENST00000384710 107 ntBASIC0.47□□□□□ -2.33
CASP4P49662 MTCO2P33-201ENST00000402100 465 ntBASIC0.47□□□□□ -2.33
CASP4P49662 AL160004.2-201ENST00000432935 350 ntBASIC0.47□□□□□ -2.33
CASP4P49662 SCARNA8-201ENST00000515924 131 ntBASIC0.47□□□□□ -2.33
CASP4P49662 AC092447.9-201ENST00000603395 144 ntBASIC0.47□□□□□ -2.33
CASP4P49662 AL606534.2-204ENST00000635008 178 ntBASIC0.47□□□□□ -2.33
CASP4P49662 MIR377-201ENST00000362145 69 ntBASIC0.46□□□□□ -2.34
CASP4P49662 Y_RNA.496-201ENST00000384444 101 ntBASIC0.46□□□□□ -2.34
CASP4P49662 MT-TN-201ENST00000387400 73 ntBASIC0.46□□□□□ -2.34
CASP4P49662 RNU6-1248P-201ENST00000391096 64 ntBASIC0.46□□□□□ -2.34
CASP4P49662 RNA5SP95-201ENST00000410319 137 ntBASIC0.46□□□□□ -2.34
CASP4P49662 RNA5SP193-201ENST00000410353 107 ntBASIC0.46□□□□□ -2.34
CASP4P49662 SNORA36B-201ENST00000410438 131 ntBASIC0.46□□□□□ -2.34
CASP4P49662 U8.20-201ENST00000459445 131 ntBASIC0.46□□□□□ -2.34
CASP4P49662 RNU4-57P-201ENST00000515980 135 ntBASIC0.46□□□□□ -2.34
CASP4P49662 RNU4-77P-201ENST00000516692 156 ntBASIC0.46□□□□□ -2.34
CASP4P49662 MIR3145-201ENST00000580727 82 ntBASIC0.46□□□□□ -2.34
CASP4P49662 AC006441.5-201ENST00000612680 209 ntBASIC0.46□□□□□ -2.34
CASP4P49662 AC015726.2-201ENST00000620112 122 ntBASIC0.46□□□□□ -2.34
CASP4P49662 RNU6-42P-201ENST00000384165 107 ntBASIC0.45□□□□□ -2.34
CASP4P49662 SNORA72.4-201ENST00000384174 132 ntBASIC0.45□□□□□ -2.34
CASP4P49662 MIR570-201ENST00000384917 97 ntBASIC0.45□□□□□ -2.34
CASP4P49662 MIR518E-201ENST00000385252 88 ntBASIC0.45□□□□□ -2.34
CASP4P49662 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.45□□□□□ -2.34
CASP4P49662 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.45□□□□□ -2.34
CASP4P49662 Y_RNA.632-201ENST00000459189 102 ntBASIC0.45□□□□□ -2.34
CASP4P49662 RNU7-141P-201ENST00000459304 62 ntBASIC0.45□□□□□ -2.34
CASP4P49662 SNORD19B-201ENST00000459623 84 ntBASIC0.45□□□□□ -2.34
CASP4P49662 FGF7P4-201ENST00000509595 295 ntBASIC0.45□□□□□ -2.34
CASP4P49662 Y_RNA.661-201ENST00000516003 99 ntBASIC0.45□□□□□ -2.34
CASP4P49662 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.45□□□□□ -2.34
CASP4P49662 RPL23AP91-201ENST00000569211 455 ntBASIC0.45□□□□□ -2.34
CASP4P49662 RNY3-201ENST00000365484 102 ntBASIC0.44□□□□□ -2.34
CASP4P49662 RNU6-937P-201ENST00000384325 106 ntBASIC0.44□□□□□ -2.34
CASP4P49662 RNU6-1237P-201ENST00000384777 107 ntBASIC0.44□□□□□ -2.34
CASP4P49662 SNORD72-201ENST00000390994 80 ntBASIC0.44□□□□□ -2.34
CASP4P49662 MIR936-201ENST00000401264 98 ntBASIC0.44□□□□□ -2.34
CASP4P49662 AL603910.2-201ENST00000407268 136 ntBASIC0.44□□□□□ -2.34
CASP4P49662 RNU4-30P-201ENST00000410245 143 ntBASIC0.44□□□□□ -2.34
CASP4P49662 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
CASP4P49662 SNORD11-201ENST00000459124 84 ntBASIC0.44□□□□□ -2.34
CASP4P49662 RNU6-976P-201ENST00000516086 111 ntBASIC0.44□□□□□ -2.34
CASP4P49662 RNU7-181P-201ENST00000517234 74 ntBASIC0.44□□□□□ -2.34
CASP4P49662 MIR4711-201ENST00000578274 70 ntBASIC0.44□□□□□ -2.34
CASP4P49662 MIR548AO-201ENST00000579992 96 ntBASIC0.44□□□□□ -2.34
CASP4P49662 AC012433.1-201ENST00000588916 398 ntBASIC0.44□□□□□ -2.34
CASP4P49662 MIR4791-201ENST00000607666 84 ntBASIC0.44□□□□□ -2.34
CASP4P49662 AC104985.2-201ENST00000620598 500 ntBASIC0.44□□□□□ -2.34
CASP4P49662 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
CASP4P49662 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CASP4P49662 RNU4-50P-201ENST00000364361 141 ntBASIC0.43□□□□□ -2.34
CASP4P49662 Y_RNA.383-201ENST00000383855 97 ntBASIC0.43□□□□□ -2.34
CASP4P49662 Y_RNA.390-201ENST00000383932 102 ntBASIC0.43□□□□□ -2.34
CASP4P49662 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
CASP4P49662 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.43□□□□□ -2.34
CASP4P49662 RNU6-847P-201ENST00000411115 108 ntBASIC0.43□□□□□ -2.34
CASP4P49662 POLR2KP2-201ENST00000438155 177 ntBASIC0.43□□□□□ -2.34
CASP4P49662 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
CASP4P49662 AC005357.1-201ENST00000588399 301 ntBASIC0.43□□□□□ -2.34
CASP4P49662 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.43□□□□□ -2.34
CASP4P49662 MTND1P7-201ENST00000632801 297 ntBASIC0.43□□□□□ -2.34
CASP4P49662 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
CASP4P49662 RNU4-80P-201ENST00000363200 141 ntBASIC0.42□□□□□ -2.34
CASP4P49662 Y_RNA.122-201ENST00000363331 96 ntBASIC0.42□□□□□ -2.34
CASP4P49662 RNU6-580P-201ENST00000365159 107 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms