Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 BTF3P11-201ENST00000426582 477 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 SNRPGP10-201ENST00000432323 225 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 AC015922.2-201ENST00000435593 184 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 U8.19-201ENST00000459095 133 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 TRBVB-201ENST00000477100 408 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 AL133373.1-201ENST00000497098 94 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 CYCTP-201ENST00000504253 315 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 RNU6-327P-201ENST00000516270 127 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 RNU6-1338P-201ENST00000516328 91 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 RNU6-113P-201ENST00000516653 101 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 AC090821.2-201ENST00000523552 176 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 DEFB108E-201ENST00000524692 240 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFRSF4P43489 JPX_2.1-201ENST00000614161 69 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.11□□□□□ -2.23
TNFRSF4P43489 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.11□□□□□ -2.23
TNFRSF4P43489 MIRLET7C-201ENST00000362160 84 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 Y_RNA.203-201ENST00000364106 102 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 Y_RNA.461-201ENST00000384263 103 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 RNU6-763P-201ENST00000390865 106 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 RNU6-131P-201ENST00000391144 107 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 MIR891A-201ENST00000401237 79 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 SNORA36B-201ENST00000410438 131 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 RNU6-1203P-201ENST00000410703 110 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 RNU6-437P-201ENST00000459408 95 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 SERF1AP1-201ENST00000514575 187 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 SCARNA15.1-201ENST00000516384 125 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 Y_RNA.714-201ENST00000517065 90 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 AC005357.1-201ENST00000588399 301 ntBASIC1.1□□□□□ -2.23
TNFRSF4P43489 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
TNFRSF4P43489 RNU6-1309P-201ENST00000363305 108 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 Y_RNA.176-201ENST00000363815 109 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 RNU6-899P-201ENST00000363947 107 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 SNORA2.2-201ENST00000365473 135 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 Y_RNA.376-201ENST00000365638 108 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 Y_RNA.574-201ENST00000384766 95 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 MTND2P23-201ENST00000422990 651 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 AC114811.1-201ENST00000507207 168 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 AL022345.2-201ENST00000606307 135 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 BX284668.6-201ENST00000606899 438 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 U6.104-201ENST00000637979 90 ntBASIC1.09□□□□□ -2.23
TNFRSF4P43489 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TNFRSF4P43489 RNU6-1272P-201ENST00000362776 107 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 RNU6-1205P-201ENST00000363625 106 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 Y_RNA.162-201ENST00000363683 102 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 Y_RNA.466-201ENST00000384294 113 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 MIR522-201ENST00000385071 87 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 MIR802-201ENST00000390235 94 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TNFRSF4P43489 MIR1302-6-201ENST00000408466 90 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 RPS29P1-201ENST00000465274 159 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 SNORA31.4-201ENST00000516049 129 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 RNU6-1223P-201ENST00000517124 104 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 SNORA70.22-201ENST00000517160 124 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 AL117187.1-201ENST00000555482 181 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 AL357312.1-201ENST00000603879 298 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 MIR6788-201ENST00000618842 66 ntBASIC1.08□□□□□ -2.24
TNFRSF4P43489 Y_RNA.47-201ENST00000362697 108 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 RNU6-833P-201ENST00000363486 107 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 Y_RNA.149-201ENST00000363558 117 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 RNY1-201ENST00000364228 113 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 Y_RNA.237-201ENST00000364439 102 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 U8.5-201ENST00000364528 136 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 SNORD41-201ENST00000386967 70 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 MIR548F4-201ENST00000408515 105 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 MIR1278-201ENST00000408753 81 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 SNORA31.2-201ENST00000516019 134 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 RNU6-947P-201ENST00000516264 106 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 RNU6-917P-201ENST00000516294 104 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 SNORD45.4-201ENST00000516629 73 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 SNORA27.4-201ENST00000516650 95 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 MIR2681-201ENST00000581814 105 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 AC022709.1-201ENST00000615967 87 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 AP001282.2-201ENST00000616149 309 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 MIR8062-201ENST00000621515 85 ntBASIC1.07□□□□□ -2.24
TNFRSF4P43489 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TNFRSF4P43489 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
TNFRSF4P43489 Y_RNA.44-201ENST00000362676 108 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 RNU6-1209P-201ENST00000363655 107 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 Y_RNA.293-201ENST00000364908 93 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 snoU2-30.1-201ENST00000365012 70 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 Y_RNA.483-201ENST00000384380 101 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFRSF4P43489 Y_RNA.637-201ENST00000459424 114 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 RN7SKP179-201ENST00000516126 217 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 RPL23AP91-201ENST00000569211 455 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 MIR151B-201ENST00000584249 96 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 MIR4762-201ENST00000585261 75 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 AL353621.2-201ENST00000605340 133 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 AC013791.1-201ENST00000616619 62 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 AC027279.3-201ENST00000625055 122 ntBASIC1.06□□□□□ -2.24
TNFRSF4P43489 AC099654.10-201ENST00000640395 161 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms