Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.31□□□□□ -2.36
SSR1P43307 MTND1P14-201ENST00000427400 950 ntBASIC0.31□□□□□ -2.36
SSR1P43307 AC005042.3-201ENST00000453230 174 ntBASIC0.31□□□□□ -2.36
SSR1P43307 Y_RNA.655-201ENST00000515919 96 ntBASIC0.31□□□□□ -2.36
SSR1P43307 RNU6-559P-201ENST00000516151 98 ntBASIC0.31□□□□□ -2.36
SSR1P43307 MIR5690-201ENST00000583739 73 ntBASIC0.31□□□□□ -2.36
SSR1P43307 AC008507.4-201ENST00000585464 127 ntBASIC0.31□□□□□ -2.36
SSR1P43307 MIR548AY-201ENST00000617669 107 ntBASIC0.31□□□□□ -2.36
SSR1P43307 Y_RNA.474-201ENST00000384341 102 ntBASIC0.3□□□□□ -2.36
SSR1P43307 BTF3P11-201ENST00000426582 477 ntBASIC0.3□□□□□ -2.36
SSR1P43307 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.3□□□□□ -2.36
SSR1P43307 Y_RNA.676-201ENST00000516393 96 ntBASIC0.3□□□□□ -2.36
SSR1P43307 Y_RNA.230-201ENST00000364348 109 ntBASIC0.29□□□□□ -2.36
SSR1P43307 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.29□□□□□ -2.36
SSR1P43307 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.29□□□□□ -2.36
SSR1P43307 Y_RNA.653-201ENST00000459091 95 ntBASIC0.29□□□□□ -2.36
SSR1P43307 RNU7-110P-201ENST00000516891 62 ntBASIC0.29□□□□□ -2.36
SSR1P43307 MIR4711-201ENST00000578274 70 ntBASIC0.29□□□□□ -2.36
SSR1P43307 MIR4804-201ENST00000581683 73 ntBASIC0.29□□□□□ -2.36
SSR1P43307 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.28□□□□□ -2.36
SSR1P43307 Y_RNA.27-201ENST00000362540 103 ntBASIC0.28□□□□□ -2.36
SSR1P43307 Y_RNA.456-201ENST00000384232 111 ntBASIC0.28□□□□□ -2.36
SSR1P43307 RNU6-937P-201ENST00000384325 106 ntBASIC0.28□□□□□ -2.36
SSR1P43307 MT-TL1-201ENST00000386347 75 ntBASIC0.28□□□□□ -2.36
SSR1P43307 MIR936-201ENST00000401264 98 ntBASIC0.28□□□□□ -2.36
SSR1P43307 RNU6-710P-201ENST00000410424 105 ntBASIC0.28□□□□□ -2.36
SSR1P43307 RNU7-141P-201ENST00000459304 62 ntBASIC0.28□□□□□ -2.36
SSR1P43307 RNA5SP436-201ENST00000516020 115 ntBASIC0.28□□□□□ -2.36
SSR1P43307 RNU7-25P-201ENST00000516544 62 ntBASIC0.28□□□□□ -2.36
SSR1P43307 RNU7-116P-201ENST00000516940 62 ntBASIC0.28□□□□□ -2.36
SSR1P43307 MIR4676-201ENST00000583078 72 ntBASIC0.28□□□□□ -2.36
SSR1P43307 AC008608.1-201ENST00000603910 127 ntBASIC0.28□□□□□ -2.36
SSR1P43307 AC084781.2-201ENST00000615568 161 ntBASIC0.28□□□□□ -2.36
SSR1P43307 AC104985.2-201ENST00000620598 500 ntBASIC0.28□□□□□ -2.36
SSR1P43307 RNU6-580P-201ENST00000365159 107 ntBASIC0.27□□□□□ -2.37
SSR1P43307 Y_RNA.537-201ENST00000384626 109 ntBASIC0.27□□□□□ -2.37
SSR1P43307 SNORA36B-201ENST00000410438 131 ntBASIC0.27□□□□□ -2.37
SSR1P43307 FCF1P9-201ENST00000412546 282 ntBASIC0.27□□□□□ -2.37
SSR1P43307 AC091959.1-201ENST00000495857 238 ntBASIC0.27□□□□□ -2.37
SSR1P43307 RNU6-830P-201ENST00000516353 107 ntBASIC0.27□□□□□ -2.37
SSR1P43307 MIR4423-201ENST00000580922 80 ntBASIC0.27□□□□□ -2.37
SSR1P43307 MIR5093-201ENST00000583199 100 ntBASIC0.27□□□□□ -2.37
SSR1P43307 MIR5188-201ENST00000583467 113 ntBASIC0.27□□□□□ -2.37
SSR1P43307 AC025253.1-201ENST00000613623 543 ntBASIC0.27□□□□□ -2.37
SSR1P43307 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
SSR1P43307 Y_RNA.80-201ENST00000362996 102 ntBASIC0.26□□□□□ -2.37
SSR1P43307 RNA5SP517-201ENST00000364724 117 ntBASIC0.26□□□□□ -2.37
SSR1P43307 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
SSR1P43307 Y_RNA.485-201ENST00000384395 102 ntBASIC0.26□□□□□ -2.37
SSR1P43307 SNORD116-29-201ENST00000384516 83 ntBASIC0.26□□□□□ -2.37
SSR1P43307 RNU6-437P-201ENST00000459408 95 ntBASIC0.26□□□□□ -2.37
SSR1P43307 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.26□□□□□ -2.37
SSR1P43307 AP000753.3-201ENST00000604083 169 ntBASIC0.26□□□□□ -2.37
SSR1P43307 SNORA25.18-201ENST00000607153 114 ntBASIC0.26□□□□□ -2.37
SSR1P43307 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.26□□□□□ -2.37
SSR1P43307 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
SSR1P43307 AC010332.2-201ENST00000613083 1904 ntBASIC0.25□□□□□ -2.37
SSR1P43307 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
SSR1P43307 RNU4-80P-201ENST00000363200 141 ntBASIC0.25□□□□□ -2.37
SSR1P43307 RNU4-50P-201ENST00000364361 141 ntBASIC0.25□□□□□ -2.37
SSR1P43307 Y_RNA.286-201ENST00000364813 102 ntBASIC0.25□□□□□ -2.37
SSR1P43307 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
SSR1P43307 RNU6-42P-201ENST00000384165 107 ntBASIC0.25□□□□□ -2.37
SSR1P43307 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
SSR1P43307 RNU7-56P-201ENST00000458744 62 ntBASIC0.25□□□□□ -2.37
SSR1P43307 RNU7-62P-201ENST00000458856 62 ntBASIC0.25□□□□□ -2.37
SSR1P43307 U8.19-201ENST00000459095 133 ntBASIC0.25□□□□□ -2.37
SSR1P43307 SNORD11-201ENST00000459124 84 ntBASIC0.25□□□□□ -2.37
SSR1P43307 RNU2-13P-201ENST00000515909 113 ntBASIC0.25□□□□□ -2.37
SSR1P43307 AC005357.1-201ENST00000588399 301 ntBASIC0.25□□□□□ -2.37
SSR1P43307 MIR4272-201ENST00000635924 64 ntBASIC0.25□□□□□ -2.37
SSR1P43307 Y_RNA.143-201ENST00000363520 106 ntBASIC0.24□□□□□ -2.37
SSR1P43307 Y_RNA.166-201ENST00000363730 102 ntBASIC0.24□□□□□ -2.37
SSR1P43307 RNU6-801P-201ENST00000364087 105 ntBASIC0.24□□□□□ -2.37
SSR1P43307 Y_RNA.376-201ENST00000365638 108 ntBASIC0.24□□□□□ -2.37
SSR1P43307 Y_RNA.496-201ENST00000384444 101 ntBASIC0.24□□□□□ -2.37
SSR1P43307 SNORA26.5-201ENST00000391215 123 ntBASIC0.24□□□□□ -2.37
SSR1P43307 MIR1287-201ENST00000408492 90 ntBASIC0.24□□□□□ -2.37
SSR1P43307 HMGN1P33-201ENST00000432945 451 ntBASIC0.24□□□□□ -2.37
SSR1P43307 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.24□□□□□ -2.37
SSR1P43307 AC011373.1-201ENST00000607270 237 ntBASIC0.24□□□□□ -2.37
SSR1P43307 uc_338.4-201ENST00000616635 176 ntBASIC0.24□□□□□ -2.37
SSR1P43307 MIR6740-201ENST00000618268 113 ntBASIC0.24□□□□□ -2.37
SSR1P43307 AL589743.1-201ENST00000551932 2712 ntBASIC0.24□□□□□ -2.37
SSR1P43307 Y_RNA.458-201ENST00000384240 102 ntBASIC0.23□□□□□ -2.37
SSR1P43307 Y_RNA.547-201ENST00000384654 119 ntBASIC0.23□□□□□ -2.37
SSR1P43307 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.23□□□□□ -2.37
SSR1P43307 RNU6-847P-201ENST00000411115 108 ntBASIC0.23□□□□□ -2.37
SSR1P43307 AC236972.2-201ENST00000434979 310 ntBASIC0.23□□□□□ -2.37
SSR1P43307 Y_RNA.661-201ENST00000516003 99 ntBASIC0.23□□□□□ -2.37
SSR1P43307 SNORA25.12-201ENST00000516202 82 ntBASIC0.23□□□□□ -2.37
SSR1P43307 RNU6-958P-201ENST00000516995 106 ntBASIC0.23□□□□□ -2.37
SSR1P43307 VN1R91P-201ENST00000594377 169 ntBASIC0.23□□□□□ -2.37
SSR1P43307 AC113139.1-201ENST00000605049 239 ntBASIC0.23□□□□□ -2.37
SSR1P43307 AL080274.1-201ENST00000605565 220 ntBASIC0.23□□□□□ -2.37
SSR1P43307 AC006441.5-201ENST00000612680 209 ntBASIC0.23□□□□□ -2.37
SSR1P43307 AC007742.2-201ENST00000618226 398 ntBASIC0.23□□□□□ -2.37
SSR1P43307 MIR377-201ENST00000362145 69 ntBASIC0.22□□□□□ -2.37
SSR1P43307 RNU6-490P-201ENST00000362985 107 ntBASIC0.22□□□□□ -2.37
SSR1P43307 Y_RNA.226-201ENST00000364337 114 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms