Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC019176.1-201ENST00000518519 225 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 AC100767.1-201ENST00000528178 123 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 Y_RNA.60-201ENST00000362831 98 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 SNORA2.2-201ENST00000365473 135 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 RNU6-442P-201ENST00000383968 104 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 Y_RNA.539-201ENST00000384635 107 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 SNORA67.5-201ENST00000391036 107 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 AL591806.2-201ENST00000433122 173 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.41□□□□□ -2.18
APOBEC1P41238 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.41□□□□□ -2.18
APOBEC1P41238 RNA5SP445-201ENST00000515889 115 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 RNU6-322P-201ENST00000516010 103 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 SNORD116-28-201ENST00000516123 91 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 RNU4-71P-201ENST00000516258 113 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 Y_RNA.680-201ENST00000516441 93 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 AL365434.2-201ENST00000607979 234 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 AL021707.8-201ENST00000609428 183 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 uc_338.4-201ENST00000616635 176 ntBASIC1.41□□□□□ -2.18
APOBEC1P41238 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
APOBEC1P41238 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
APOBEC1P41238 Y_RNA.188-201ENST00000363952 111 ntBASIC1.4□□□□□ -2.19
APOBEC1P41238 Y_RNA.269-201ENST00000364685 89 ntBASIC1.4□□□□□ -2.19
APOBEC1P41238 MIR1298-201ENST00000408783 112 ntBASIC1.4□□□□□ -2.19
APOBEC1P41238 AC092991.1-201ENST00000477176 376 ntBASIC1.4□□□□□ -2.19
APOBEC1P41238 AC090049.2-201ENST00000550377 109 ntBASIC1.4□□□□□ -2.19
APOBEC1P41238 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.4□□□□□ -2.19
APOBEC1P41238 AC008507.4-201ENST00000585464 127 ntBASIC1.4□□□□□ -2.19
APOBEC1P41238 AL049861.1-201ENST00000603130 150 ntBASIC1.4□□□□□ -2.19
APOBEC1P41238 AL513534.2-201ENST00000603836 250 ntBASIC1.4□□□□□ -2.19
APOBEC1P41238 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.4□□□□□ -2.19
APOBEC1P41238 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
APOBEC1P41238 MIR653-201ENST00000385279 96 ntBASIC1.39□□□□□ -2.19
APOBEC1P41238 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
APOBEC1P41238 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.39□□□□□ -2.19
APOBEC1P41238 MIR4524B-201ENST00000581569 115 ntBASIC1.39□□□□□ -2.19
APOBEC1P41238 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
APOBEC1P41238 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
APOBEC1P41238 RNU6-653P-201ENST00000363074 106 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 Y_RNA.229-201ENST00000364347 113 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 RNY4P28-201ENST00000365281 93 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 RNU4-17P-201ENST00000365598 141 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 Y_RNA.572-201ENST00000384757 98 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 MT-TG-201ENST00000387429 68 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 Y_RNA.587-201ENST00000391210 103 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 AL451046.2-201ENST00000403074 277 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
APOBEC1P41238 snoU13.23-201ENST00000458863 104 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 SNORD13-201ENST00000459299 104 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 COX6CP14-201ENST00000469580 174 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 RNU6-917P-201ENST00000516294 104 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 RNU7-149P-201ENST00000516739 59 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 RNU6-1271P-201ENST00000517049 105 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 RNU6-111P-201ENST00000517179 105 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 RNU6-902P-201ENST00000517212 91 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
APOBEC1P41238 AC011921.3-201ENST00000605540 361 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 AL121890.5-201ENST00000620848 304 ntBASIC1.38□□□□□ -2.19
APOBEC1P41238 SNORD38C-201ENST00000384381 69 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 MIR526A1-201ENST00000384897 85 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 MIR15B-201ENST00000385045 98 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 MIR136-201ENST00000385207 82 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 SNORD72-201ENST00000390994 80 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 AC015922.2-201ENST00000435593 184 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.37□□□□□ -2.19
APOBEC1P41238 RPL30P7-201ENST00000479312 323 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 AC108210.2-201ENST00000503681 201 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 RNU6-126P-201ENST00000516685 103 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 MIR4662B-201ENST00000579498 81 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 FAM106DP-201ENST00000586416 501 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 AP000942.4-201ENST00000604811 241 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 Pinc.1-201ENST00000616452 154 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.37□□□□□ -2.19
APOBEC1P41238 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOBEC1P41238 RNU6-60P-201ENST00000364792 103 ntBASIC1.36□□□□□ -2.19
APOBEC1P41238 RNU6-1138P-201ENST00000365359 106 ntBASIC1.36□□□□□ -2.19
APOBEC1P41238 RNY3P5-201ENST00000384127 102 ntBASIC1.36□□□□□ -2.19
APOBEC1P41238 MIR616-201ENST00000385293 97 ntBASIC1.36□□□□□ -2.19
APOBEC1P41238 SNORD77.4-201ENST00000516158 81 ntBASIC1.36□□□□□ -2.19
APOBEC1P41238 RNU6-922P-201ENST00000516753 99 ntBASIC1.36□□□□□ -2.19
APOBEC1P41238 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
APOBEC1P41238 AC090142.3-201ENST00000519012 385 ntBASIC1.36□□□□□ -2.19
APOBEC1P41238 GHRLOS.1-201ENST00000610995 70 ntBASIC1.36□□□□□ -2.19
APOBEC1P41238 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.35□□□□□ -2.19
APOBEC1P41238 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
APOBEC1P41238 RNY1-201ENST00000364228 113 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 Y_RNA.308-201ENST00000365043 101 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 Y_RNA.476-201ENST00000384347 108 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 MIR516B2-201ENST00000385190 85 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 Y_RNA.626-201ENST00000411288 95 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 AC245047.8-201ENST00000456455 284 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.35□□□□□ -2.19
APOBEC1P41238 RN7SKP164-201ENST00000516138 266 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 AC015712.3-201ENST00000559380 164 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms