Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL391903.3-201ENST00000612158 163 ntBASIC1.21□□□□□ -2.22
HADHAP40939 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
HADHAP40939 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
HADHAP40939 Y_RNA.105-201ENST00000363182 111 ntBASIC1.2□□□□□ -2.22
HADHAP40939 RNU6-1205P-201ENST00000363625 106 ntBASIC1.2□□□□□ -2.22
HADHAP40939 Y_RNA.216-201ENST00000364205 93 ntBASIC1.2□□□□□ -2.22
HADHAP40939 Y_RNA.269-201ENST00000364685 89 ntBASIC1.2□□□□□ -2.22
HADHAP40939 MIR19B1-201ENST00000384829 87 ntBASIC1.2□□□□□ -2.22
HADHAP40939 SNORD79.1-201ENST00000516069 84 ntBASIC1.2□□□□□ -2.22
HADHAP40939 AP003733.2-201ENST00000529409 171 ntBASIC1.2□□□□□ -2.22
HADHAP40939 AC008507.4-201ENST00000585464 127 ntBASIC1.2□□□□□ -2.22
HADHAP40939 AL096861.1-201ENST00000610899 123 ntBASIC1.2□□□□□ -2.22
HADHAP40939 AC091895.1-201ENST00000624494 256 ntBASIC1.2□□□□□ -2.22
HADHAP40939 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
HADHAP40939 AL391516.1-201ENST00000554380 2449 ntBASIC1.19□□□□□ -2.22
HADHAP40939 snoU2_19.2-201ENST00000363024 80 ntBASIC1.19□□□□□ -2.22
HADHAP40939 RNA5SP48-201ENST00000363969 126 ntBASIC1.19□□□□□ -2.22
HADHAP40939 RNU6-1048P-201ENST00000364054 107 ntBASIC1.19□□□□□ -2.22
HADHAP40939 MIR520C-201ENST00000385005 87 ntBASIC1.19□□□□□ -2.22
HADHAP40939 RNU6-763P-201ENST00000390865 106 ntBASIC1.19□□□□□ -2.22
HADHAP40939 RNA5SP496-201ENST00000391240 109 ntBASIC1.19□□□□□ -2.22
HADHAP40939 MTCO2P33-201ENST00000402100 465 ntBASIC1.19□□□□□ -2.22
HADHAP40939 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
HADHAP40939 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
HADHAP40939 NDUFA4P2-201ENST00000489989 244 ntBASIC1.19□□□□□ -2.22
HADHAP40939 RPL23AP91-201ENST00000569211 455 ntBASIC1.19□□□□□ -2.22
HADHAP40939 MIR5688-201ENST00000580619 83 ntBASIC1.19□□□□□ -2.22
HADHAP40939 PRELID3BP2-201ENST00000605362 201 ntBASIC1.19□□□□□ -2.22
HADHAP40939 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.19□□□□□ -2.22
HADHAP40939 AC013791.1-201ENST00000616619 62 ntBASIC1.19□□□□□ -2.22
HADHAP40939 RNU6-1272P-201ENST00000362776 107 ntBASIC1.18□□□□□ -2.22
HADHAP40939 Y_RNA.153-201ENST00000363615 91 ntBASIC1.18□□□□□ -2.22
HADHAP40939 Y_RNA.541-201ENST00000384640 113 ntBASIC1.18□□□□□ -2.22
HADHAP40939 AC063976.4-201ENST00000421971 163 ntBASIC1.18□□□□□ -2.22
HADHAP40939 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
HADHAP40939 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.18□□□□□ -2.22
HADHAP40939 SNORD11-201ENST00000459124 84 ntBASIC1.18□□□□□ -2.22
HADHAP40939 SNORD123-201ENST00000459473 70 ntBASIC1.18□□□□□ -2.22
HADHAP40939 MRPS35P2-201ENST00000508242 191 ntBASIC1.18□□□□□ -2.22
HADHAP40939 MIR4764-201ENST00000580680 88 ntBASIC1.18□□□□□ -2.22
HADHAP40939 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
HADHAP40939 RNU6-53P-201ENST00000365367 106 ntBASIC1.17□□□□□ -2.22
HADHAP40939 Y_RNA.370-201ENST00000365589 108 ntBASIC1.17□□□□□ -2.22
HADHAP40939 RNU6-1067P-201ENST00000384752 107 ntBASIC1.17□□□□□ -2.22
HADHAP40939 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
HADHAP40939 AC113618.1-201ENST00000416747 285 ntBASIC1.17□□□□□ -2.22
HADHAP40939 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.17□□□□□ -2.22
HADHAP40939 SNORA27.4-201ENST00000516650 95 ntBASIC1.17□□□□□ -2.22
HADHAP40939 SNORA18.7-201ENST00000516910 131 ntBASIC1.17□□□□□ -2.22
HADHAP40939 AL442663.2-201ENST00000554385 511 ntBASIC1.17□□□□□ -2.22
HADHAP40939 UBE2WP1-201ENST00000362030 340 ntBASIC1.16□□□□□ -2.22
HADHAP40939 Y_RNA.14-201ENST00000362415 103 ntBASIC1.16□□□□□ -2.22
HADHAP40939 SNRPGP14-201ENST00000435400 219 ntBASIC1.16□□□□□ -2.22
HADHAP40939 Y_RNA.637-201ENST00000459424 114 ntBASIC1.16□□□□□ -2.22
HADHAP40939 AC091959.1-201ENST00000495857 238 ntBASIC1.16□□□□□ -2.22
HADHAP40939 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.16□□□□□ -2.22
HADHAP40939 MIR5692C2-201ENST00000577959 77 ntBASIC1.16□□□□□ -2.22
HADHAP40939 AC006441.5-201ENST00000612680 209 ntBASIC1.16□□□□□ -2.22
HADHAP40939 Pinc.1-201ENST00000616452 154 ntBASIC1.16□□□□□ -2.22
HADHAP40939 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
HADHAP40939 AC134026.1-201ENST00000623249 2239 ntBASIC1.15□□□□□ -2.23
HADHAP40939 MIR200A-201ENST00000384875 90 ntBASIC1.15□□□□□ -2.23
HADHAP40939 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
HADHAP40939 RPL21P38-201ENST00000418090 167 ntBASIC1.15□□□□□ -2.23
HADHAP40939 RNU7-90P-201ENST00000459216 62 ntBASIC1.15□□□□□ -2.23
HADHAP40939 AC098869.1-201ENST00000481627 292 ntBASIC1.15□□□□□ -2.23
HADHAP40939 RNU6-126P-201ENST00000516685 103 ntBASIC1.15□□□□□ -2.23
HADHAP40939 RNA5SP102-201ENST00000516865 106 ntBASIC1.15□□□□□ -2.23
HADHAP40939 MIR3192-201ENST00000584920 77 ntBASIC1.15□□□□□ -2.23
HADHAP40939 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.15□□□□□ -2.23
HADHAP40939 MIR367-201ENST00000362299 68 ntBASIC1.14□□□□□ -2.23
HADHAP40939 RNA5SP264-201ENST00000363115 107 ntBASIC1.14□□□□□ -2.23
HADHAP40939 RNU6-268P-201ENST00000364174 107 ntBASIC1.14□□□□□ -2.23
HADHAP40939 Y_RNA.217-201ENST00000364214 105 ntBASIC1.14□□□□□ -2.23
HADHAP40939 MIR215-201ENST00000384858 110 ntBASIC1.14□□□□□ -2.23
HADHAP40939 Y_RNA.641-201ENST00000459414 105 ntBASIC1.14□□□□□ -2.23
HADHAP40939 RNU7-21P-201ENST00000459430 62 ntBASIC1.14□□□□□ -2.23
HADHAP40939 SERF1AP1-201ENST00000514575 187 ntBASIC1.14□□□□□ -2.23
HADHAP40939 RNU11-2P-201ENST00000516898 142 ntBASIC1.14□□□□□ -2.23
HADHAP40939 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.14□□□□□ -2.23
HADHAP40939 MIR4724-201ENST00000579485 89 ntBASIC1.14□□□□□ -2.23
HADHAP40939 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.14□□□□□ -2.23
HADHAP40939 Y_RNA.64-201ENST00000362845 102 ntBASIC1.13□□□□□ -2.23
HADHAP40939 Y_RNA.84-201ENST00000363011 104 ntBASIC1.13□□□□□ -2.23
HADHAP40939 Y_RNA.116-201ENST00000363292 103 ntBASIC1.13□□□□□ -2.23
HADHAP40939 Y_RNA.191-201ENST00000363972 113 ntBASIC1.13□□□□□ -2.23
HADHAP40939 Y_RNA.224-201ENST00000364308 111 ntBASIC1.13□□□□□ -2.23
HADHAP40939 SNORA1.2-201ENST00000365189 134 ntBASIC1.13□□□□□ -2.23
HADHAP40939 Y_RNA.363-201ENST00000365529 113 ntBASIC1.13□□□□□ -2.23
HADHAP40939 MIR518E-201ENST00000385252 88 ntBASIC1.13□□□□□ -2.23
HADHAP40939 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
HADHAP40939 AC002429.1-201ENST00000437672 148 ntBASIC1.13□□□□□ -2.23
HADHAP40939 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
HADHAP40939 RNU6-1137P-201ENST00000517073 99 ntBASIC1.13□□□□□ -2.23
HADHAP40939 AP003716.2-201ENST00000528260 108 ntBASIC1.13□□□□□ -2.23
HADHAP40939 MIR4662B-201ENST00000579498 81 ntBASIC1.13□□□□□ -2.23
HADHAP40939 U6.104-201ENST00000637979 90 ntBASIC1.13□□□□□ -2.23
HADHAP40939 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HADHAP40939 Y_RNA.118-201ENST00000363300 101 ntBASIC1.12□□□□□ -2.23
HADHAP40939 Y_RNA.122-201ENST00000363331 96 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms