Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 Y_RNA.164-201ENST00000363709 102 ntBASIC1.08□□□□□ -2.24
FEN1P39748 SNORD14E-201ENST00000364009 85 ntBASIC1.08□□□□□ -2.24
FEN1P39748 SNORA63C-201ENST00000364578 129 ntBASIC1.08□□□□□ -2.24
FEN1P39748 RNU6-144P-201ENST00000383951 107 ntBASIC1.08□□□□□ -2.24
FEN1P39748 MIR606-201ENST00000384851 96 ntBASIC1.08□□□□□ -2.24
FEN1P39748 MIR136-201ENST00000385207 82 ntBASIC1.08□□□□□ -2.24
FEN1P39748 RNU6-1054P-201ENST00000411293 104 ntBASIC1.08□□□□□ -2.24
FEN1P39748 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
FEN1P39748 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.08□□□□□ -2.24
FEN1P39748 SERF1AP1-201ENST00000514575 187 ntBASIC1.08□□□□□ -2.24
FEN1P39748 RNU6-635P-201ENST00000516651 102 ntBASIC1.08□□□□□ -2.24
FEN1P39748 SCARNA24.2-201ENST00000516968 130 ntBASIC1.08□□□□□ -2.24
FEN1P39748 MIR5692C2-201ENST00000577959 77 ntBASIC1.08□□□□□ -2.24
FEN1P39748 AC087685.1-201ENST00000587507 141 ntBASIC1.08□□□□□ -2.24
FEN1P39748 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
FEN1P39748 Y_RNA.217-201ENST00000364214 105 ntBASIC1.07□□□□□ -2.24
FEN1P39748 Y_RNA.376-201ENST00000365638 108 ntBASIC1.07□□□□□ -2.24
FEN1P39748 BTF3P11-201ENST00000426582 477 ntBASIC1.07□□□□□ -2.24
FEN1P39748 Y_RNA.641-201ENST00000459414 105 ntBASIC1.07□□□□□ -2.24
FEN1P39748 RNU7-40P-201ENST00000516397 64 ntBASIC1.07□□□□□ -2.24
FEN1P39748 DEFB108E-201ENST00000524692 240 ntBASIC1.07□□□□□ -2.24
FEN1P39748 AC007742.2-201ENST00000618226 398 ntBASIC1.07□□□□□ -2.24
FEN1P39748 snoU18.1-201ENST00000629629 71 ntBASIC1.07□□□□□ -2.24
FEN1P39748 RNU6-238P-201ENST00000363313 106 ntBASIC1.06□□□□□ -2.24
FEN1P39748 RNU6-383P-201ENST00000410864 94 ntBASIC1.06□□□□□ -2.24
FEN1P39748 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.06□□□□□ -2.24
FEN1P39748 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
FEN1P39748 RPL39P39-201ENST00000455840 151 ntBASIC1.06□□□□□ -2.24
FEN1P39748 SNORD11-201ENST00000459124 84 ntBASIC1.06□□□□□ -2.24
FEN1P39748 TRBVB-201ENST00000477100 408 ntBASIC1.06□□□□□ -2.24
FEN1P39748 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
FEN1P39748 SNORA31.2-201ENST00000516019 134 ntBASIC1.06□□□□□ -2.24
FEN1P39748 SNORA18.7-201ENST00000516910 131 ntBASIC1.06□□□□□ -2.24
FEN1P39748 MIR4781-201ENST00000585250 76 ntBASIC1.06□□□□□ -2.24
FEN1P39748 AC008507.4-201ENST00000585464 127 ntBASIC1.06□□□□□ -2.24
FEN1P39748 AL096861.1-201ENST00000610899 123 ntBASIC1.06□□□□□ -2.24
FEN1P39748 AP001282.2-201ENST00000616149 309 ntBASIC1.06□□□□□ -2.24
FEN1P39748 AL442644.1-201ENST00000454390 3105 ntBASIC1.05□□□□□ -2.24
FEN1P39748 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.05□□□□□ -2.24
FEN1P39748 UBE2WP1-201ENST00000362030 340 ntBASIC1.05□□□□□ -2.24
FEN1P39748 RNY1P10-201ENST00000363268 113 ntBASIC1.05□□□□□ -2.24
FEN1P39748 RNU6-713P-201ENST00000384761 107 ntBASIC1.05□□□□□ -2.24
FEN1P39748 SNORD72-201ENST00000390994 80 ntBASIC1.05□□□□□ -2.24
FEN1P39748 AC245047.7-201ENST00000440265 293 ntBASIC1.05□□□□□ -2.24
FEN1P39748 SNORA74.3-201ENST00000517108 154 ntBASIC1.05□□□□□ -2.24
FEN1P39748 MIR3192-201ENST00000584920 77 ntBASIC1.05□□□□□ -2.24
FEN1P39748 AC008737.2-201ENST00000599446 118 ntBASIC1.05□□□□□ -2.24
FEN1P39748 AL022345.2-201ENST00000606307 135 ntBASIC1.05□□□□□ -2.24
FEN1P39748 AL008718.3-201ENST00000610217 321 ntBASIC1.05□□□□□ -2.24
FEN1P39748 Y_RNA.4-201ENST00000362333 112 ntBASIC1.04□□□□□ -2.24
FEN1P39748 Y_RNA.145-201ENST00000363527 102 ntBASIC1.04□□□□□ -2.24
FEN1P39748 Y_RNA.293-201ENST00000364908 93 ntBASIC1.04□□□□□ -2.24
FEN1P39748 RNU6-442P-201ENST00000383968 104 ntBASIC1.04□□□□□ -2.24
FEN1P39748 SNORA25-201ENST00000384384 134 ntBASIC1.04□□□□□ -2.24
FEN1P39748 MIR548F4-201ENST00000408515 105 ntBASIC1.04□□□□□ -2.24
FEN1P39748 SNRPGP14-201ENST00000435400 219 ntBASIC1.04□□□□□ -2.24
FEN1P39748 snoU13.25-201ENST00000458945 104 ntBASIC1.04□□□□□ -2.24
FEN1P39748 SNORD111.1-201ENST00000516421 86 ntBASIC1.04□□□□□ -2.24
FEN1P39748 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.04□□□□□ -2.24
FEN1P39748 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.04□□□□□ -2.24
FEN1P39748 AC136443.5-201ENST00000603741 370 ntBASIC1.04□□□□□ -2.24
FEN1P39748 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
FEN1P39748 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
FEN1P39748 RNU6-268P-201ENST00000364174 107 ntBASIC1.03□□□□□ -2.24
FEN1P39748 Y_RNA.237-201ENST00000364439 102 ntBASIC1.03□□□□□ -2.24
FEN1P39748 Y_RNA.363-201ENST00000365529 113 ntBASIC1.03□□□□□ -2.24
FEN1P39748 RNU6-738P-201ENST00000384531 106 ntBASIC1.03□□□□□ -2.24
FEN1P39748 MIR520C-201ENST00000385005 87 ntBASIC1.03□□□□□ -2.24
FEN1P39748 MIR15B-201ENST00000385045 98 ntBASIC1.03□□□□□ -2.24
FEN1P39748 MIR802-201ENST00000390235 94 ntBASIC1.03□□□□□ -2.24
FEN1P39748 RNU6-910P-201ENST00000390844 107 ntBASIC1.03□□□□□ -2.24
FEN1P39748 AL603910.2-201ENST00000407268 136 ntBASIC1.03□□□□□ -2.24
FEN1P39748 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.03□□□□□ -2.24
FEN1P39748 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
FEN1P39748 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.03□□□□□ -2.24
FEN1P39748 SNORA31.4-201ENST00000516049 129 ntBASIC1.03□□□□□ -2.24
FEN1P39748 RNU6-1007P-201ENST00000516586 107 ntBASIC1.03□□□□□ -2.24
FEN1P39748 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
FEN1P39748 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
FEN1P39748 BX284668.6-201ENST00000606899 438 ntBASIC1.03□□□□□ -2.24
FEN1P39748 MIR8062-201ENST00000621515 85 ntBASIC1.03□□□□□ -2.24
FEN1P39748 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.24
FEN1P39748 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.02□□□□□ -2.25
FEN1P39748 Y_RNA.117-201ENST00000363294 101 ntBASIC1.02□□□□□ -2.25
FEN1P39748 Y_RNA.275-201ENST00000364726 110 ntBASIC1.02□□□□□ -2.25
FEN1P39748 RNU6-392P-201ENST00000364926 101 ntBASIC1.02□□□□□ -2.25
FEN1P39748 RNU6-53P-201ENST00000365367 106 ntBASIC1.02□□□□□ -2.25
FEN1P39748 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
FEN1P39748 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
FEN1P39748 SNORD38C-201ENST00000384381 69 ntBASIC1.02□□□□□ -2.25
FEN1P39748 RNU6-1289P-201ENST00000384431 106 ntBASIC1.02□□□□□ -2.25
FEN1P39748 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
FEN1P39748 Y_RNA.574-201ENST00000384766 95 ntBASIC1.02□□□□□ -2.25
FEN1P39748 MT-TW-201ENST00000387382 68 ntBASIC1.02□□□□□ -2.25
FEN1P39748 MIR1302-6-201ENST00000408466 90 ntBASIC1.02□□□□□ -2.25
FEN1P39748 SNORD123-201ENST00000459473 70 ntBASIC1.02□□□□□ -2.25
FEN1P39748 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.02□□□□□ -2.25
FEN1P39748 MIR4724-201ENST00000579485 89 ntBASIC1.02□□□□□ -2.25
FEN1P39748 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
FEN1P39748 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 236.9 ms