Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MIR4667-201ENST00000578933 66 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 MIR4804-201ENST00000581683 73 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 AC005176.2-201ENST00000596933 147 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 AP003357.1-201ENST00000604497 148 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 MIR3688-2-201ENST00000636963 87 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 Y_RNA.146-201ENST00000363549 102 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 Y_RNA.331-201ENST00000365267 102 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 SNORD14.1-201ENST00000365609 90 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 RNU6-20P-201ENST00000384106 107 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 SNORD28B-201ENST00000390993 75 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 SNORD78.2-201ENST00000391076 69 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 RNU6-192P-201ENST00000391253 100 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 MIR1265-201ENST00000408444 86 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 MIR1827-201ENST00000408549 66 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 MIR548F1-201ENST00000408667 84 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 Y_RNA.653-201ENST00000459091 95 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 RNU6-863P-201ENST00000515989 104 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 MIR4802-201ENST00000581881 80 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 MIR5690-201ENST00000583739 73 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.27□□□□□ -2.37
BRCA1P38398 Y_RNA.168-201ENST00000363740 102 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 SNRPGP10-201ENST00000432323 225 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 RPL30P15-201ENST00000457129 321 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 AC011352.1-201ENST00000512300 793 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 RNU6-120P-201ENST00000516077 103 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 RNU7-115P-201ENST00000516433 55 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 AC005014.2-201ENST00000607795 599 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 Pinc.1-201ENST00000616452 154 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 MIR6516-201ENST00000630554 81 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 TPTEP1-208ENST00000636884 213 ntBASIC0.26□□□□□ -2.37
BRCA1P38398 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 RNU6-1264P-201ENST00000383891 107 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 RNA5SP95-201ENST00000410319 137 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.25□□□□□ -2.37
BRCA1P38398 AL035398.1-201ENST00000430869 322 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 SNRPGP14-201ENST00000435400 219 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 HMGN2P32-201ENST00000444648 269 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 AC067940.1-201ENST00000458411 300 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 MIR4300-201ENST00000581016 96 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 MIR2681-201ENST00000581814 105 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 AC006441.5-201ENST00000612680 209 ntBASIC0.25□□□□□ -2.37
BRCA1P38398 RNU6-369P-201ENST00000362515 102 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 RNU6-602P-201ENST00000411155 105 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 FCF1P9-201ENST00000412546 282 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.24□□□□□ -2.37
BRCA1P38398 AC104692.1-201ENST00000472406 90 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.24□□□□□ -2.37
BRCA1P38398 AC093027.1-201ENST00000546698 429 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 AC133104.2-201ENST00000615272 193 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.24□□□□□ -2.37
BRCA1P38398 Y_RNA.88-201ENST00000363029 99 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 RNU6-1175P-201ENST00000365200 107 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 RNU4-45P-201ENST00000365469 141 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 RNU6-945P-201ENST00000383947 107 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 RNU6-855P-201ENST00000410395 104 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 Z95118.1-201ENST00000421372 247 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 AF228730.4-201ENST00000421457 183 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 MIR4791-201ENST00000607666 84 ntBASIC0.24□□□□□ -2.37
BRCA1P38398 Y_RNA.72-201ENST00000362894 103 ntBASIC0.23□□□□□ -2.37
BRCA1P38398 RNA5SP48-201ENST00000363969 126 ntBASIC0.23□□□□□ -2.37
BRCA1P38398 SNORD38B-201ENST00000384690 67 ntBASIC0.23□□□□□ -2.37
BRCA1P38398 Y_RNA.621-201ENST00000411065 96 ntBASIC0.23□□□□□ -2.37
BRCA1P38398 AL162730.1-201ENST00000605734 292 ntBASIC0.23□□□□□ -2.37
BRCA1P38398 SNORD38B-202ENST00000625943 69 ntBASIC0.23□□□□□ -2.37
BRCA1P38398 SNORD116-29-201ENST00000384516 83 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 MTCO3P10-201ENST00000455912 772 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 snoU13.16-201ENST00000459350 104 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 SNORD123-201ENST00000459473 70 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 RNU6-155P-201ENST00000516347 100 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.22□□□□□ -2.37
BRCA1P38398 RNU6-94P-201ENST00000607728 107 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 MIR18A-201ENST00000362310 71 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 SNORD116-4-201ENST00000384733 96 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 MIR573-201ENST00000384964 99 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.22□□□□□ -2.37
BRCA1P38398 AC023449.1-201ENST00000454464 154 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.22□□□□□ -2.37
BRCA1P38398 RNU6-966P-201ENST00000516479 104 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 AC024405.2-202ENST00000532731 184 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 AL669831.3-213ENST00000636676 183 ntBASIC0.22□□□□□ -2.37
BRCA1P38398 MIR140-201ENST00000385282 100 ntBASIC0.21□□□□□ -2.38
BRCA1P38398 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.21□□□□□ -2.38
BRCA1P38398 RNU6-847P-201ENST00000411115 108 ntBASIC0.21□□□□□ -2.38
BRCA1P38398 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.21□□□□□ -2.38
BRCA1P38398 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
BRCA1P38398 AC092634.7-201ENST00000621022 103 ntBASIC0.21□□□□□ -2.38
BRCA1P38398 AC098679.4-201ENST00000624241 654 ntBASIC0.21□□□□□ -2.38
BRCA1P38398 SNORA9.1-201ENST00000362412 131 ntBASIC0.2□□□□□ -2.38
BRCA1P38398 Y_RNA.86-201ENST00000363020 111 ntBASIC0.2□□□□□ -2.38
BRCA1P38398 RNA5SP331-201ENST00000364986 107 ntBASIC0.2□□□□□ -2.38
BRCA1P38398 Y_RNA.570-201ENST00000384750 101 ntBASIC0.2□□□□□ -2.38
BRCA1P38398 Y_RNA.646-201ENST00000410980 101 ntBASIC0.2□□□□□ -2.38
BRCA1P38398 MTND1P2-201ENST00000430604 821 ntBASIC0.2□□□□□ -2.38
BRCA1P38398 RNU6-437P-201ENST00000459408 95 ntBASIC0.2□□□□□ -2.38
BRCA1P38398 RNU6-699P-201ENST00000517081 110 ntBASIC0.2□□□□□ -2.38
BRCA1P38398 AC022523.2-201ENST00000561045 150 ntBASIC0.2□□□□□ -2.38
BRCA1P38398 AC022140.2-201ENST00000623500 188 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms