Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGCLP35914 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGCLP35914 RPL23AP54-201ENST00000495129 419 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 RNU6-830P-201ENST00000516353 107 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 SNORD45.4-201ENST00000516629 73 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 MIR2681-201ENST00000581814 105 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 AC008507.4-201ENST00000585464 127 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 MIR8062-201ENST00000621515 85 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 AC106754.2-201ENST00000623006 233 ntBASIC1.04□□□□□ -2.24
HMGCLP35914 Y_RNA.376-201ENST00000365638 108 ntBASIC1.03□□□□□ -2.24
HMGCLP35914 RNU6-163P-201ENST00000384396 106 ntBASIC1.03□□□□□ -2.24
HMGCLP35914 Y_RNA.621-201ENST00000411065 96 ntBASIC1.03□□□□□ -2.24
HMGCLP35914 PIGPP3-201ENST00000425307 415 ntBASIC1.03□□□□□ -2.24
HMGCLP35914 SNORD2.1-201ENST00000458762 69 ntBASIC1.03□□□□□ -2.24
HMGCLP35914 AC090142.3-201ENST00000519012 385 ntBASIC1.03□□□□□ -2.24
HMGCLP35914 AP003716.2-201ENST00000528260 108 ntBASIC1.03□□□□□ -2.24
HMGCLP35914 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.03□□□□□ -2.24
HMGCLP35914 AL008718.3-201ENST00000610217 321 ntBASIC1.03□□□□□ -2.24
HMGCLP35914 AC007742.2-201ENST00000618226 398 ntBASIC1.03□□□□□ -2.24
HMGCLP35914 Y_RNA.275-201ENST00000364726 110 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 snoU2-30.1-201ENST00000365012 70 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 Y_RNA.574-201ENST00000384766 95 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 RNU6-131P-201ENST00000391144 107 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 snoU13.25-201ENST00000458945 104 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 COX6CP14-201ENST00000469580 174 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 RPS23P4-201ENST00000487908 423 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.02□□□□□ -2.25
HMGCLP35914 RNU6-322P-201ENST00000516010 103 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 SNORD116-28-201ENST00000516123 91 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 RNU6-922P-201ENST00000516753 99 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 MIR5692C2-201ENST00000577959 77 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 AC136443.5-201ENST00000603741 370 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 AL357312.1-201ENST00000603879 298 ntBASIC1.02□□□□□ -2.25
HMGCLP35914 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGCLP35914 AC134026.1-201ENST00000623249 2239 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 SNORA25.1-201ENST00000362326 128 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.82-201ENST00000363000 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.92-201ENST00000363043 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.133-201ENST00000363428 110 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.235-201ENST00000364412 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.306-201ENST00000365015 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.312-201ENST00000365089 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.322-201ENST00000365151 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 MT-TW-201ENST00000387382 68 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 MIR526A2-201ENST00000390198 65 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 AL451046.2-201ENST00000403074 277 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 AL603910.2-201ENST00000407268 136 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.650-201ENST00000459002 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.777-201ENST00000516982 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.714-201ENST00000517065 90 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGCLP35914 MIR4282-201ENST00000583613 67 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 AL512605.2-201ENST00000592972 256 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.771-201ENST00000598668 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 AC006441.5-201ENST00000612680 209 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
HMGCLP35914 Y_RNA.789-201ENST00000622480 102 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 snoU18.1-201ENST00000629629 71 ntBASIC1.01□□□□□ -2.25
HMGCLP35914 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HMGCLP35914 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
HMGCLP35914 RNA5SP496-201ENST00000391240 109 ntBASIC1□□□□□ -2.25
HMGCLP35914 MTCO2P33-201ENST00000402100 465 ntBASIC1□□□□□ -2.25
HMGCLP35914 TRBVB-201ENST00000477100 408 ntBASIC1□□□□□ -2.25
HMGCLP35914 RN7SKP88-201ENST00000516847 250 ntBASIC1□□□□□ -2.25
HMGCLP35914 SNORA74.3-201ENST00000517108 154 ntBASIC1□□□□□ -2.25
HMGCLP35914 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1□□□□□ -2.25
HMGCLP35914 PRELID3BP2-201ENST00000605362 201 ntBASIC1□□□□□ -2.25
HMGCLP35914 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
HMGCLP35914 7SK.8-201ENST00000612110 250 ntBASIC1□□□□□ -2.25
HMGCLP35914 7SK.11-201ENST00000615477 250 ntBASIC1□□□□□ -2.25
HMGCLP35914 7SK.13-201ENST00000622040 250 ntBASIC1□□□□□ -2.25
HMGCLP35914 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HMGCLP35914 RNU6-1205P-201ENST00000363625 106 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 RNU6-268P-201ENST00000364174 107 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 Y_RNA.237-201ENST00000364439 102 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 RNU6-1138P-201ENST00000365359 106 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 RNU6-662P-201ENST00000384253 104 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 Y_RNA.512-201ENST00000384518 102 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 MIR15B-201ENST00000385045 98 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 AC245047.7-201ENST00000440265 293 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 AC245047.8-201ENST00000456455 284 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 MTATP8P1-201ENST00000467115 207 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGCLP35914 SCARNA15.1-201ENST00000516384 125 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 RNU6-635P-201ENST00000516651 102 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGCLP35914 AC037487.3-201ENST00000606668 112 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 AL096861.1-201ENST00000610899 123 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 U2.14-201ENST00000615943 113 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 AC012676.2-201ENST00000619258 186 ntBASIC0.99□□□□□ -2.25
HMGCLP35914 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HMGCLP35914 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HMGCLP35914 RNA5SP327-201ENST00000362494 101 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 Y_RNA.483-201ENST00000384380 101 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 MIR136-201ENST00000385207 82 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 MTCO2P24-201ENST00000515611 426 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 DEFB108E-201ENST00000524692 240 ntBASIC0.98□□□□□ -2.25
HMGCLP35914 RPL23AP91-201ENST00000569211 455 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms