Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU7-116P-201ENST00000516940 62 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 AC063944.3-201ENST00000609969 533 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.2□□□□□ -2.44
RPA3P35244 AL109933.3-201ENST00000619095 188 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 MIR6755-201ENST00000619993 66 ntBASIC-0.2□□□□□ -2.44
RPA3P35244 RNU6-626P-201ENST00000363354 107 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 SNORA63C-201ENST00000364578 129 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 AL603910.2-201ENST00000407268 136 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 MIR1257-201ENST00000408490 117 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 RNA5SP127-201ENST00000411051 133 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 MTND4P28-201ENST00000426217 387 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 AC069271.1-201ENST00000445577 156 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 snoU13.16-201ENST00000459350 104 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 RNU6-448P-201ENST00000517052 107 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 AC024405.2-202ENST00000532731 184 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 AC134878.1-201ENST00000619901 243 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 AC092794.2-201ENST00000620933 563 ntBASIC-0.21□□□□□ -2.44
RPA3P35244 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 MIR518F-201ENST00000384973 87 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 FCF1P4-201ENST00000448326 183 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 RPL17P19-201ENST00000489069 552 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 RNU6-470P-201ENST00000515954 104 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 RNU4-49P-201ENST00000516080 140 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 RNU6-314P-201ENST00000516574 104 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 AC109635.3-201ENST00000529536 185 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.22□□□□□ -2.44
RPA3P35244 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.22□□□□□ -2.44
RPA3P35244 MIR5188-201ENST00000583467 113 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 AC006441.5-201ENST00000612680 209 ntBASIC-0.22□□□□□ -2.44
RPA3P35244 RNU6-99P-201ENST00000364721 107 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 MIR7-2-201ENST00000384970 110 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 MIR1278-201ENST00000408753 81 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 MCFD2P1-201ENST00000417812 300 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 RNA5SP268-201ENST00000516828 124 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 AL355297.3-201ENST00000604082 446 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 AP003357.1-201ENST00000604497 148 ntBASIC-0.23□□□□□ -2.45
RPA3P35244 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 RNA5SP457-201ENST00000363657 124 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 SNORD116-9-201ENST00000384000 95 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 SNORD116-3-201ENST00000384287 95 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 SNORD116-7-201ENST00000384404 95 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 SNORD116-5-201ENST00000384462 95 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 SNORD38B-201ENST00000384690 67 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 MIR588-201ENST00000384900 83 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 MIR610-201ENST00000385139 96 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 MIR644A-201ENST00000385262 94 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 MIR643-201ENST00000385267 97 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 AL590004.1-201ENST00000405321 300 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 RPS3AP52-201ENST00000435639 297 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 RNU7-67P-201ENST00000459003 62 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 AC245008.1-201ENST00000608123 476 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 SNORD38B-202ENST00000625943 69 ntBASIC-0.24□□□□□ -2.45
RPA3P35244 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.25□□□□□ -2.45
RPA3P35244 U8.7-201ENST00000364940 136 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 SNORA24-201ENST00000384096 131 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 RNU6-127P-201ENST00000390897 107 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 RNU6-710P-201ENST00000410424 105 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 MTND3P10-201ENST00000450967 341 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 RNU7-129P-201ENST00000516128 62 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 RNU7-115P-201ENST00000516433 55 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 AC127455.1-201ENST00000565496 145 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 AC011476.5-201ENST00000615594 130 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 AC022306.2-201ENST00000617563 647 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 AC087588.2-201ENST00000617667 426 ntBASIC-0.25□□□□□ -2.45
RPA3P35244 SNORA72.1-201ENST00000363485 129 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 RNA5SP325-201ENST00000363756 130 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 RNU6-593P-201ENST00000364716 112 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 MIR593-201ENST00000384856 100 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 MIR145-201ENST00000384967 88 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 SNORA69.1-201ENST00000390904 137 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 SNORA26.5-201ENST00000391215 123 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 RNA5SP496-201ENST00000391240 109 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 MIR548F5-201ENST00000408421 86 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 RNU2-16P-201ENST00000410712 136 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.26□□□□□ -2.45
RPA3P35244 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.26□□□□□ -2.45
RPA3P35244 AC107297.1-201ENST00000459991 176 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 RNU6-506P-201ENST00000516553 94 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.26□□□□□ -2.45
RPA3P35244 MIR7107-201ENST00000611489 80 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 AC090517.2-201ENST00000614966 680 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 AC015540.1-201ENST00000615828 501 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 AC067863.3-201ENST00000624172 122 ntBASIC-0.26□□□□□ -2.45
RPA3P35244 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.27□□□□□ -2.45
RPA3P35244 SNORA32.1-201ENST00000364514 115 ntBASIC-0.27□□□□□ -2.45
RPA3P35244 RNU6-187P-201ENST00000384139 106 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms