Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 AP003357.1-201ENST00000604497 148 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 AL162730.1-201ENST00000605734 292 ntBASIC0.18□□□□□ -2.38
SLC6A1P30531 MIR103A1-201ENST00000362165 78 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 Y_RNA.85-201ENST00000363014 111 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU6-934P-201ENST00000365154 107 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU6-1175P-201ENST00000365200 107 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU6-708P-201ENST00000384217 107 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU6-1215P-201ENST00000384441 102 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU6-310P-201ENST00000384655 107 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 Y_RNA.570-201ENST00000384750 101 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 MIR802-201ENST00000390235 94 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU6-370P-201ENST00000411008 104 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNA5SP127-201ENST00000411051 133 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RPL23AP54-201ENST00000495129 419 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 AC091951.2-201ENST00000500762 203 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU7-30P-201ENST00000516835 62 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU7-4P-201ENST00000516961 62 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 RN7SKP295-201ENST00000517264 153 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 AC127455.1-201ENST00000565496 145 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 MIR4804-201ENST00000581683 73 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 MIR5188-201ENST00000583467 113 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 LARP7P1-201ENST00000605576 316 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 U6.92-201ENST00000636464 89 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 TPTEP1-208ENST00000636884 213 ntBASIC0.17□□□□□ -2.38
SLC6A1P30531 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.17□□□□□ -2.38
SLC6A1P30531 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 RNU4-45P-201ENST00000365469 141 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 RNU6-890P-201ENST00000384121 107 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 Y_RNA.456-201ENST00000384232 111 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 Y_RNA.476-201ENST00000384347 108 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 SNORD72-201ENST00000390994 80 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 RNU2-13P-201ENST00000515909 113 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 RNU7-115P-201ENST00000516433 55 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 RNU6-264P-201ENST00000517134 104 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 AC144568.1-201ENST00000520139 137 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 MIR4264-201ENST00000583520 66 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 AP000753.3-201ENST00000604083 169 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 AC020891.4-201ENST00000605745 93 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 AC084782.3-201ENST00000612282 578 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 AC092634.7-201ENST00000621022 103 ntBASIC0.16□□□□□ -2.38
SLC6A1P30531 RNU6-1188P-201ENST00000363795 107 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 U8.7-201ENST00000364940 136 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 Y_RNA.318-201ENST00000365131 97 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 RNA5SP63-201ENST00000391225 112 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 AL603910.2-201ENST00000407268 136 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 AC090844.1-201ENST00000422019 156 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 BTF3P11-201ENST00000426582 477 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 AC005042.3-201ENST00000453230 174 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 RNA5SP330-201ENST00000517096 96 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 MIR4431-201ENST00000579990 94 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 MIR4676-201ENST00000583078 72 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 DEFB117-201ENST00000602356 141 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 MIR548AY-201ENST00000617669 107 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 U2.1-201ENST00000618978 145 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 AC098679.4-201ENST00000624241 654 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 AC138305.3-201ENST00000624988 240 ntBASIC0.15□□□□□ -2.39
SLC6A1P30531 RNA5SP517-201ENST00000364724 117 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 MIR1278-201ENST00000408753 81 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 Y_RNA.605-201ENST00000410577 105 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.14□□□□□ -2.39
SLC6A1P30531 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.14□□□□□ -2.39
SLC6A1P30531 MTATP6P26-201ENST00000445926 662 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 Y_RNA.635-201ENST00000459041 101 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 RNU6-358P-201ENST00000516564 75 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 Y_RNA.691-201ENST00000516611 103 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 MIR4423-201ENST00000580922 80 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 AC006441.5-201ENST00000612680 209 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 uc_338.6-201ENST00000613544 171 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 uc_338.4-201ENST00000616635 176 ntBASIC0.14□□□□□ -2.39
SLC6A1P30531 SNORD81.1-201ENST00000363064 77 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 SNORD44.1-201ENST00000363202 61 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 RNU4-67P-201ENST00000364569 141 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 SNORA1.2-201ENST00000365189 134 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 RNU6-716P-201ENST00000365621 103 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
SLC6A1P30531 SNORD116-4-201ENST00000384733 96 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 MIR518A1-201ENST00000385068 85 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 MIR628-201ENST00000385229 95 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 RNU6-847P-201ENST00000411115 108 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.13□□□□□ -2.39
SLC6A1P30531 SNRPGP12-201ENST00000449481 213 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.13□□□□□ -2.39
SLC6A1P30531 RNU7-56P-201ENST00000458744 62 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 AC091959.1-201ENST00000495857 238 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 MIR4514-201ENST00000581410 57 ntBASIC0.13□□□□□ -2.39
SLC6A1P30531 Y_RNA.27-201ENST00000362540 103 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 Y_RNA.258-201ENST00000364613 105 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 RNU6-679P-201ENST00000391003 106 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.12□□□□□ -2.39
SLC6A1P30531 RNU2-70P-201ENST00000410718 179 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 AL358176.2-201ENST00000425769 204 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 AC096644.2-201ENST00000429278 159 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.12□□□□□ -2.39
SLC6A1P30531 RNU7-62P-201ENST00000458856 62 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 SCARNA8-201ENST00000515924 131 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms