Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNU6-1065P-201ENST00000384513 106 ntBASIC1.28□□□□□ -2.2
CDH3P22223 SNORD41-201ENST00000386967 70 ntBASIC1.28□□□□□ -2.2
CDH3P22223 MTCYBP9-201ENST00000431021 303 ntBASIC1.28□□□□□ -2.2
CDH3P22223 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
CDH3P22223 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.28□□□□□ -2.2
CDH3P22223 AC005840.1-201ENST00000498412 377 ntBASIC1.28□□□□□ -2.2
CDH3P22223 MTCO2P24-201ENST00000515611 426 ntBASIC1.28□□□□□ -2.2
CDH3P22223 SNORD45.4-201ENST00000516629 73 ntBASIC1.28□□□□□ -2.2
CDH3P22223 RNU6-922P-201ENST00000516753 99 ntBASIC1.28□□□□□ -2.2
CDH3P22223 MIR5692C2-201ENST00000577959 77 ntBASIC1.28□□□□□ -2.2
CDH3P22223 U2.14-201ENST00000615943 113 ntBASIC1.28□□□□□ -2.2
CDH3P22223 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.28□□□□□ -2.2
CDH3P22223 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.21
CDH3P22223 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
CDH3P22223 Y_RNA.44-201ENST00000362676 108 ntBASIC1.27□□□□□ -2.21
CDH3P22223 RNU6-1205P-201ENST00000363625 106 ntBASIC1.27□□□□□ -2.21
CDH3P22223 Y_RNA.164-201ENST00000363709 102 ntBASIC1.27□□□□□ -2.21
CDH3P22223 SNORA2.2-201ENST00000365473 135 ntBASIC1.27□□□□□ -2.21
CDH3P22223 RNU6-1289P-201ENST00000384431 106 ntBASIC1.27□□□□□ -2.21
CDH3P22223 AL118496.2-201ENST00000448300 230 ntBASIC1.27□□□□□ -2.21
CDH3P22223 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.27□□□□□ -2.21
CDH3P22223 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.27□□□□□ -2.21
CDH3P22223 AC090049.2-201ENST00000550377 109 ntBASIC1.27□□□□□ -2.21
CDH3P22223 MIR3664-201ENST00000579074 99 ntBASIC1.27□□□□□ -2.21
CDH3P22223 AL513534.2-201ENST00000603836 250 ntBASIC1.27□□□□□ -2.21
CDH3P22223 JPX_2.1-201ENST00000614161 69 ntBASIC1.27□□□□□ -2.21
CDH3P22223 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDH3P22223 AL442644.1-201ENST00000454390 3105 ntBASIC1.26□□□□□ -2.21
CDH3P22223 Y_RNA.4-201ENST00000362333 112 ntBASIC1.26□□□□□ -2.21
CDH3P22223 RNU6-740P-201ENST00000364734 105 ntBASIC1.26□□□□□ -2.21
CDH3P22223 RNU6-144P-201ENST00000383951 107 ntBASIC1.26□□□□□ -2.21
CDH3P22223 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
CDH3P22223 RNU6-383P-201ENST00000410864 94 ntBASIC1.26□□□□□ -2.21
CDH3P22223 RNU6-651P-201ENST00000411040 105 ntBASIC1.26□□□□□ -2.21
CDH3P22223 SNORD11-201ENST00000459124 84 ntBASIC1.26□□□□□ -2.21
CDH3P22223 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
CDH3P22223 RNU6-165P-201ENST00000517170 99 ntBASIC1.26□□□□□ -2.21
CDH3P22223 RPL23AP91-201ENST00000569211 455 ntBASIC1.26□□□□□ -2.21
CDH3P22223 MIR6078-201ENST00000611069 100 ntBASIC1.26□□□□□ -2.21
CDH3P22223 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH3P22223 RNU6-1084P-201ENST00000362498 107 ntBASIC1.25□□□□□ -2.21
CDH3P22223 snoU2-30.1-201ENST00000365012 70 ntBASIC1.25□□□□□ -2.21
CDH3P22223 RNU6-211P-201ENST00000384047 107 ntBASIC1.25□□□□□ -2.21
CDH3P22223 MIR1298-201ENST00000408783 112 ntBASIC1.25□□□□□ -2.21
CDH3P22223 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.25□□□□□ -2.21
CDH3P22223 CYP3A52P-201ENST00000563326 91 ntBASIC1.25□□□□□ -2.21
CDH3P22223 MIR2681-201ENST00000581814 105 ntBASIC1.25□□□□□ -2.21
CDH3P22223 MIR4781-201ENST00000585250 76 ntBASIC1.25□□□□□ -2.21
CDH3P22223 AL021707.8-201ENST00000609428 183 ntBASIC1.25□□□□□ -2.21
CDH3P22223 U6.104-201ENST00000637979 90 ntBASIC1.25□□□□□ -2.21
CDH3P22223 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CDH3P22223 RNU4-10P-201ENST00000364383 140 ntBASIC1.24□□□□□ -2.21
CDH3P22223 SNORA70.7-201ENST00000384159 133 ntBASIC1.24□□□□□ -2.21
CDH3P22223 MIR452-201ENST00000385020 85 ntBASIC1.24□□□□□ -2.21
CDH3P22223 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CDH3P22223 SNORA40.6-201ENST00000391153 128 ntBASIC1.24□□□□□ -2.21
CDH3P22223 RNU2-38P-201ENST00000410856 79 ntBASIC1.24□□□□□ -2.21
CDH3P22223 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
CDH3P22223 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.24□□□□□ -2.21
CDH3P22223 Y_RNA.714-201ENST00000517065 90 ntBASIC1.24□□□□□ -2.21
CDH3P22223 AC090142.3-201ENST00000519012 385 ntBASIC1.24□□□□□ -2.21
CDH3P22223 AC087685.1-201ENST00000587507 141 ntBASIC1.24□□□□□ -2.21
CDH3P22223 AC012433.1-201ENST00000588916 398 ntBASIC1.24□□□□□ -2.21
CDH3P22223 Y_RNA.336-201ENST00000365307 109 ntBASIC1.23□□□□□ -2.21
CDH3P22223 AL451046.2-201ENST00000403074 277 ntBASIC1.23□□□□□ -2.21
CDH3P22223 HMGN2P32-201ENST00000444648 269 ntBASIC1.23□□□□□ -2.21
CDH3P22223 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.23□□□□□ -2.21
CDH3P22223 SNORD2.1-201ENST00000458762 69 ntBASIC1.23□□□□□ -2.21
CDH3P22223 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
CDH3P22223 AC008507.4-201ENST00000585464 127 ntBASIC1.23□□□□□ -2.21
CDH3P22223 FAM106DP-201ENST00000586416 501 ntBASIC1.23□□□□□ -2.21
CDH3P22223 GHRLOS.1-201ENST00000610995 70 ntBASIC1.23□□□□□ -2.21
CDH3P22223 Y_RNA.82-201ENST00000363000 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.92-201ENST00000363043 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.235-201ENST00000364412 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.293-201ENST00000364908 93 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.306-201ENST00000365015 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.312-201ENST00000365089 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.322-201ENST00000365151 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 MIR516B2-201ENST00000385190 85 ntBASIC1.22□□□□□ -2.21
CDH3P22223 SNORD72-201ENST00000390994 80 ntBASIC1.22□□□□□ -2.21
CDH3P22223 AL603910.2-201ENST00000407268 136 ntBASIC1.22□□□□□ -2.21
CDH3P22223 RNA5SP247-201ENST00000411181 105 ntBASIC1.22□□□□□ -2.21
CDH3P22223 SNRPGP14-201ENST00000435400 219 ntBASIC1.22□□□□□ -2.21
CDH3P22223 MTND3P2-201ENST00000438452 342 ntBASIC1.22□□□□□ -2.21
CDH3P22223 SNORD127-201ENST00000458892 86 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.650-201ENST00000459002 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 RNU6-322P-201ENST00000516010 103 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.777-201ENST00000516982 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.771-201ENST00000598668 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 Y_RNA.789-201ENST00000622480 102 ntBASIC1.22□□□□□ -2.21
CDH3P22223 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CDH3P22223 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CDH3P22223 MIR367-201ENST00000362299 68 ntBASIC1.21□□□□□ -2.22
CDH3P22223 MIR526A2-201ENST00000390198 65 ntBASIC1.21□□□□□ -2.22
CDH3P22223 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
CDH3P22223 Y_RNA.668-201ENST00000516233 93 ntBASIC1.21□□□□□ -2.22
CDH3P22223 RN7SKP88-201ENST00000516847 250 ntBASIC1.21□□□□□ -2.22
CDH3P22223 MIR4643-201ENST00000577473 78 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 251.4 ms