Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SNORA40.8-201ENST00000411034 126 ntBASIC0.1□□□□□ -2.39
CTLA4P16410 AC016907.1-201ENST00000419483 435 ntBASIC0.1□□□□□ -2.39
CTLA4P16410 AC024067.1-201ENST00000426199 223 ntBASIC0.1□□□□□ -2.39
CTLA4P16410 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.1□□□□□ -2.39
CTLA4P16410 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.1□□□□□ -2.39
CTLA4P16410 SNRPGP12-201ENST00000449481 213 ntBASIC0.1□□□□□ -2.39
CTLA4P16410 SNORA25.12-201ENST00000516202 82 ntBASIC0.1□□□□□ -2.39
CTLA4P16410 AC022523.2-201ENST00000561045 150 ntBASIC0.1□□□□□ -2.39
CTLA4P16410 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.1□□□□□ -2.39
CTLA4P16410 AC020891.4-201ENST00000605745 93 ntBASIC0.1□□□□□ -2.39
CTLA4P16410 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
CTLA4P16410 RNY1-201ENST00000364228 113 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 RNA5SP517-201ENST00000364724 117 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 Y_RNA.355-201ENST00000365462 98 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 SNORD100-201ENST00000408573 76 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 MIR548F1-201ENST00000408667 84 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 Y_RNA.646-201ENST00000410980 101 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 AF228730.4-201ENST00000421457 183 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.09□□□□□ -2.4
CTLA4P16410 RNU7-30P-201ENST00000516835 62 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 MIR4431-201ENST00000579990 94 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 MIR4423-201ENST00000580922 80 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 MIR548AY-201ENST00000617669 107 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 U2.1-201ENST00000618978 145 ntBASIC0.09□□□□□ -2.4
CTLA4P16410 Y_RNA.27-201ENST00000362540 103 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 RNU6-674P-201ENST00000363831 107 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 SNORA63C-201ENST00000364578 129 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 RNU6-310P-201ENST00000384655 107 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 SNORD72-201ENST00000390994 80 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 RNU6-679P-201ENST00000391003 106 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 MIR938-201ENST00000401216 83 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 AL590004.1-201ENST00000405321 300 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 AL603910.2-201ENST00000407268 136 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 RNU4-14P-201ENST00000410858 122 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 SNORD71-201ENST00000411292 86 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 AC015818.7-201ENST00000428754 109 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 AC087499.7-201ENST00000441958 109 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 Y_RNA.635-201ENST00000459041 101 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 snoU13.16-201ENST00000459350 104 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 RNU7-169P-201ENST00000459456 61 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 snoU13.18-201ENST00000459483 104 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 RNU6-718P-201ENST00000516166 105 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 RNU6-358P-201ENST00000516564 75 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 Y_RNA.691-201ENST00000516611 103 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 MIR5690-201ENST00000583739 73 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 AC098679.4-201ENST00000624241 654 ntBASIC0.08□□□□□ -2.4
CTLA4P16410 RNA5SP62-201ENST00000363457 110 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 RNU6-1188P-201ENST00000363795 107 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 SNORA24-201ENST00000384096 131 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 RNU6-1215P-201ENST00000384441 102 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 MIR628-201ENST00000385229 95 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 Y_RNA.599-201ENST00000410489 109 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.07□□□□□ -2.4
CTLA4P16410 RNU7-62P-201ENST00000458856 62 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 AC090897.1-201ENST00000580909 226 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 AL355297.3-201ENST00000604082 446 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 AC078938.1-201ENST00000620993 318 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 AC138305.3-201ENST00000624988 240 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 U6.92-201ENST00000636464 89 ntBASIC0.07□□□□□ -2.4
CTLA4P16410 SNORD81.1-201ENST00000363064 77 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 SNORD118-201ENST00000363593 134 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 RNY3P11-201ENST00000364153 102 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
CTLA4P16410 Y_RNA.462-201ENST00000384268 102 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 RNU6-370P-201ENST00000411008 104 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 AC090844.1-201ENST00000422019 156 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 BTF3P11-201ENST00000426582 477 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.06□□□□□ -2.4
CTLA4P16410 MIR18B-201ENST00000454574 71 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 RNU6-437P-201ENST00000459408 95 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 AC107297.1-201ENST00000459991 176 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 AC091959.1-201ENST00000495857 238 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 RNU6-863P-201ENST00000515989 104 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 RNA5SP94-201ENST00000516917 108 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 RPL23AP91-201ENST00000569211 455 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 DEFB117-201ENST00000602356 141 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 AL080274.1-201ENST00000605565 220 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 AC010205.1-201ENST00000616668 449 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 uc_338.16-201ENST00000621804 95 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
CTLA4P16410 RNU4-50P-201ENST00000364361 141 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 Y_RNA.269-201ENST00000364685 89 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 Y_RNA.331-201ENST00000365267 102 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 RNU6-890P-201ENST00000384121 107 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 RNU6-708P-201ENST00000384217 107 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 SNORD11-201ENST00000459124 84 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 AC069439.1-201ENST00000494739 167 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 SNORA18.4-201ENST00000516440 124 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 PVT1_3.1-201ENST00000620853 95 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 AC010487.4-201ENST00000637027 61 ntBASIC0.05□□□□□ -2.4
CTLA4P16410 Y_RNA.6-201ENST00000362350 114 ntBASIC0.04□□□□□ -2.4
CTLA4P16410 RNU6-845P-201ENST00000362578 103 ntBASIC0.04□□□□□ -2.4
CTLA4P16410 Y_RNA.166-201ENST00000363730 102 ntBASIC0.04□□□□□ -2.4
CTLA4P16410 Y_RNA.314-201ENST00000365114 102 ntBASIC0.04□□□□□ -2.4
CTLA4P16410 Y_RNA.508-201ENST00000384502 114 ntBASIC0.04□□□□□ -2.4
CTLA4P16410 MIR1278-201ENST00000408753 81 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms