Protein–RNA interactions for Protein: P0CW19

LIMS3, LIM and senescent cell antigen-like-containing domain protein 3, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3P0CW19 RNU7-129P-201ENST00000516128 62 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 MTND3P12-201ENST00000559068 328 ntBASIC-0.34□□□□□ -2.46
LIMS3P0CW19 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.34□□□□□ -2.46
LIMS3P0CW19 U8.7-201ENST00000364940 136 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 FCF1P4-201ENST00000448326 183 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 MIR4790-201ENST00000577799 79 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 MIR2681-201ENST00000581814 105 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 MIR4760-201ENST00000585040 80 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 AP003357.1-201ENST00000604497 148 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 MIR7107-201ENST00000611489 80 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 AC024614.3-201ENST00000637860 256 ntBASIC-0.35□□□□□ -2.47
LIMS3P0CW19 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.36□□□□□ -2.47
LIMS3P0CW19 RNU7-67P-201ENST00000459003 62 ntBASIC-0.36□□□□□ -2.47
LIMS3P0CW19 AC104692.1-201ENST00000472406 90 ntBASIC-0.36□□□□□ -2.47
LIMS3P0CW19 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.36□□□□□ -2.47
LIMS3P0CW19 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.36□□□□□ -2.47
LIMS3P0CW19 RN7SKP299-201ENST00000606679 301 ntBASIC-0.36□□□□□ -2.47
LIMS3P0CW19 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.36□□□□□ -2.47
LIMS3P0CW19 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 RNU6-926P-201ENST00000384075 107 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 RNU6-601P-201ENST00000384540 107 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 RNU6-831P-201ENST00000384548 107 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 MT-TF-201ENST00000387314 71 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 MIR760-201ENST00000390220 80 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 MTND4P28-201ENST00000426217 387 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 AC024405.2-202ENST00000532731 184 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 Z99129.1-201ENST00000612510 255 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.37□□□□□ -2.47
LIMS3P0CW19 RNU6-593P-201ENST00000364716 112 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 SNORD116-8-201ENST00000384365 95 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 SNORD72-201ENST00000390994 80 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 AL603910.2-201ENST00000407268 136 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 MCFD2P1-201ENST00000417812 300 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 snoU13.2-201ENST00000459201 104 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 AC127455.1-201ENST00000565496 145 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 AC078883.4-201ENST00000623218 367 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 MIR6828-201ENST00000636181 60 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 Z97988.1-201ENST00000637697 135 ntBASIC-0.38□□□□□ -2.47
LIMS3P0CW19 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 RNA5SP128-201ENST00000365305 116 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 RNU6-20P-201ENST00000384106 107 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 RNU6-929P-201ENST00000384429 107 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 MIR214-201ENST00000385214 110 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.39□□□□□ -2.47
LIMS3P0CW19 MIR2053-201ENST00000459295 91 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 MTND5P5-201ENST00000503764 376 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 AC005899.2-201ENST00000584353 90 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 MIR1244-1-201ENST00000612829 85 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 AC092794.2-201ENST00000620933 563 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 MIR1244-3-201ENST00000635744 85 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 MIR1244-2-201ENST00000636449 85 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 MIR1244-4-202ENST00000636813 85 ntBASIC-0.39□□□□□ -2.47
LIMS3P0CW19 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-34-201ENST00000362441 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-12-201ENST00000362583 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-29-201ENST00000362834 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-9-201ENST00000362912 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-21-201ENST00000362963 81 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-14-201ENST00000363090 81 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 RNU6-626P-201ENST00000363354 107 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-13-201ENST00000363358 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-41-201ENST00000363608 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-11-201ENST00000363616 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-5-201ENST00000363633 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-39-201ENST00000363694 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-4-201ENST00000363810 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-16-201ENST00000363887 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-6-201ENST00000363942 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-42-201ENST00000364273 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-15-201ENST00000364809 81 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-1-201ENST00000364961 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-26-201ENST00000365067 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-10-201ENST00000365073 81 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-43-201ENST00000365503 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-36-201ENST00000365629 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 RNU7-73P-201ENST00000458743 63 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 RNU6-470P-201ENST00000515954 104 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 RNU4-49P-201ENST00000516080 140 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 RNU7-115P-201ENST00000516433 55 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 RNU6-135P-201ENST00000516769 101 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 SNORD115-40-201ENST00000606510 82 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 MIR8055-201ENST00000610739 97 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.4□□□□□ -2.47
LIMS3P0CW19 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.41□□□□□ -2.48
LIMS3P0CW19 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.41□□□□□ -2.48
LIMS3P0CW19 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.41□□□□□ -2.48
LIMS3P0CW19 RNU6-187P-201ENST00000384139 106 ntBASIC-0.41□□□□□ -2.48
LIMS3P0CW19 MIR563-201ENST00000385080 79 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms