Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RNU6-121P-201ENST00000410525 99 ntBASIC0.89□□□□□ -2.27
VIMP08670 RPS3AP1-201ENST00000413190 320 ntBASIC0.89□□□□□ -2.27
VIMP08670 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.89□□□□□ -2.27
VIMP08670 MTCO1P5-201ENST00000433573 344 ntBASIC0.89□□□□□ -2.27
VIMP08670 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.89□□□□□ -2.27
VIMP08670 RNU6-830P-201ENST00000516353 107 ntBASIC0.89□□□□□ -2.27
VIMP08670 AC131055.1-201ENST00000584626 316 ntBASIC0.89□□□□□ -2.27
VIMP08670 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
VIMP08670 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
VIMP08670 Y_RNA.128-201ENST00000363391 112 ntBASIC0.88□□□□□ -2.27
VIMP08670 SNORA22B-201ENST00000383876 138 ntBASIC0.88□□□□□ -2.27
VIMP08670 MIR570-201ENST00000384917 97 ntBASIC0.88□□□□□ -2.27
VIMP08670 Y_RNA.581-201ENST00000391017 97 ntBASIC0.88□□□□□ -2.27
VIMP08670 U8.17-201ENST00000391292 132 ntBASIC0.88□□□□□ -2.27
VIMP08670 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.88□□□□□ -2.27
VIMP08670 AC005840.1-201ENST00000498412 377 ntBASIC0.88□□□□□ -2.27
VIMP08670 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.88□□□□□ -2.27
VIMP08670 RNA5SP458-201ENST00000516188 119 ntBASIC0.88□□□□□ -2.27
VIMP08670 RNA5SP255-201ENST00000516370 107 ntBASIC0.88□□□□□ -2.27
VIMP08670 AC109810.1-201ENST00000534066 224 ntBASIC0.88□□□□□ -2.27
VIMP08670 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.88□□□□□ -2.27
VIMP08670 AC134503.1-201ENST00000633048 54 ntBASIC0.88□□□□□ -2.27
VIMP08670 Y_RNA.61-201ENST00000362835 102 ntBASIC0.87□□□□□ -2.27
VIMP08670 Y_RNA.138-201ENST00000363462 102 ntBASIC0.87□□□□□ -2.27
VIMP08670 RNU6-1205P-201ENST00000363625 106 ntBASIC0.87□□□□□ -2.27
VIMP08670 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
VIMP08670 Y_RNA.535-201ENST00000384612 99 ntBASIC0.87□□□□□ -2.27
VIMP08670 MIR1302-7-201ENST00000408841 72 ntBASIC0.87□□□□□ -2.27
VIMP08670 AL606490.4-201ENST00000423117 127 ntBASIC0.87□□□□□ -2.27
VIMP08670 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.87□□□□□ -2.27
VIMP08670 FABP5P4-201ENST00000437203 171 ntBASIC0.87□□□□□ -2.27
VIMP08670 AL392103.1-201ENST00000447000 198 ntBASIC0.87□□□□□ -2.27
VIMP08670 RNU6-1007P-201ENST00000516586 107 ntBASIC0.87□□□□□ -2.27
VIMP08670 RNU6-197P-201ENST00000516680 100 ntBASIC0.87□□□□□ -2.27
VIMP08670 SNORA40.15-201ENST00000516884 107 ntBASIC0.87□□□□□ -2.27
VIMP08670 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.87□□□□□ -2.27
VIMP08670 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.87□□□□□ -2.27
VIMP08670 AC015726.2-201ENST00000620112 122 ntBASIC0.87□□□□□ -2.27
VIMP08670 HSBP1P2-201ENST00000299671 229 ntBASIC0.86□□□□□ -2.27
VIMP08670 Y_RNA.327-201ENST00000365201 102 ntBASIC0.86□□□□□ -2.27
VIMP08670 Y_RNA.380-201ENST00000365663 111 ntBASIC0.86□□□□□ -2.27
VIMP08670 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.86□□□□□ -2.27
VIMP08670 ELOCP20-201ENST00000422460 345 ntBASIC0.86□□□□□ -2.27
VIMP08670 Y_RNA.637-201ENST00000459424 114 ntBASIC0.86□□□□□ -2.27
VIMP08670 AC098869.1-201ENST00000481627 292 ntBASIC0.86□□□□□ -2.27
VIMP08670 RNU11-2P-201ENST00000516898 142 ntBASIC0.86□□□□□ -2.27
VIMP08670 RNU7-181P-201ENST00000517234 74 ntBASIC0.86□□□□□ -2.27
VIMP08670 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.86□□□□□ -2.27
VIMP08670 AL512605.2-201ENST00000592972 256 ntBASIC0.86□□□□□ -2.27
VIMP08670 AC006441.5-201ENST00000612680 209 ntBASIC0.86□□□□□ -2.27
VIMP08670 AC091895.1-201ENST00000624494 256 ntBASIC0.86□□□□□ -2.27
VIMP08670 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
VIMP08670 RNU6-290P-201ENST00000365212 101 ntBASIC0.85□□□□□ -2.27
VIMP08670 RNU6-144P-201ENST00000383951 107 ntBASIC0.85□□□□□ -2.27
VIMP08670 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
VIMP08670 MIR100-201ENST00000385259 80 ntBASIC0.85□□□□□ -2.27
VIMP08670 RNU6-383P-201ENST00000410864 94 ntBASIC0.85□□□□□ -2.27
VIMP08670 AC006461.1-201ENST00000412637 326 ntBASIC0.85□□□□□ -2.27
VIMP08670 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
VIMP08670 Y_RNA.711-201ENST00000516993 102 ntBASIC0.85□□□□□ -2.27
VIMP08670 AC013791.1-201ENST00000616619 62 ntBASIC0.85□□□□□ -2.27
VIMP08670 snoU2_19.2-201ENST00000363024 80 ntBASIC0.84□□□□□ -2.27
VIMP08670 Y_RNA.214-201ENST00000364201 112 ntBASIC0.84□□□□□ -2.27
VIMP08670 RNU6-654P-201ENST00000364373 107 ntBASIC0.84□□□□□ -2.27
VIMP08670 Y_RNA.242-201ENST00000364473 110 ntBASIC0.84□□□□□ -2.27
VIMP08670 Y_RNA.527-201ENST00000384573 102 ntBASIC0.84□□□□□ -2.27
VIMP08670 Y_RNA.541-201ENST00000384640 113 ntBASIC0.84□□□□□ -2.27
VIMP08670 MIR215-201ENST00000384858 110 ntBASIC0.84□□□□□ -2.27
VIMP08670 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
VIMP08670 MIR548P-201ENST00000408336 84 ntBASIC0.84□□□□□ -2.27
VIMP08670 RPL21P38-201ENST00000418090 167 ntBASIC0.84□□□□□ -2.27
VIMP08670 RNY3P15-201ENST00000516297 97 ntBASIC0.84□□□□□ -2.27
VIMP08670 RNU2-31P-201ENST00000516954 155 ntBASIC0.84□□□□□ -2.27
VIMP08670 AC131281.1-201ENST00000522984 164 ntBASIC0.84□□□□□ -2.27
VIMP08670 AC036111.3-201ENST00000526389 112 ntBASIC0.84□□□□□ -2.27
VIMP08670 snoU13.31-201ENST00000607291 104 ntBASIC0.84□□□□□ -2.27
VIMP08670 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
VIMP08670 MIR6715A-201ENST00000615929 79 ntBASIC0.84□□□□□ -2.27
VIMP08670 MIR6516-201ENST00000630554 81 ntBASIC0.84□□□□□ -2.27
VIMP08670 AC068700.1-201ENST00000565862 3754 ntBASIC0.83□□□□□ -2.28
VIMP08670 RNU6-770P-201ENST00000363929 105 ntBASIC0.83□□□□□ -2.28
VIMP08670 Y_RNA.210-201ENST00000364161 110 ntBASIC0.83□□□□□ -2.28
VIMP08670 Y_RNA.216-201ENST00000364205 93 ntBASIC0.83□□□□□ -2.28
VIMP08670 RNU6-806P-201ENST00000365147 105 ntBASIC0.83□□□□□ -2.28
VIMP08670 Y_RNA.455-201ENST00000384230 98 ntBASIC0.83□□□□□ -2.28
VIMP08670 RNU6-1067P-201ENST00000384752 107 ntBASIC0.83□□□□□ -2.28
VIMP08670 MIR605-201ENST00000385078 83 ntBASIC0.83□□□□□ -2.28
VIMP08670 RNU2-64P-201ENST00000411315 191 ntBASIC0.83□□□□□ -2.28
VIMP08670 MTCO2P12-201ENST00000427426 682 ntBASIC0.83□□□□□ -2.28
VIMP08670 AL035398.1-201ENST00000430869 322 ntBASIC0.83□□□□□ -2.28
VIMP08670 AC023449.1-201ENST00000454464 154 ntBASIC0.83□□□□□ -2.28
VIMP08670 RNU4-57P-201ENST00000515980 135 ntBASIC0.83□□□□□ -2.28
VIMP08670 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
VIMP08670 RNU6-94P-201ENST00000607728 107 ntBASIC0.83□□□□□ -2.28
VIMP08670 AC022140.2-201ENST00000623500 188 ntBASIC0.83□□□□□ -2.28
VIMP08670 SNORA25.1-201ENST00000362326 128 ntBASIC0.82□□□□□ -2.28
VIMP08670 Y_RNA.19-201ENST00000362462 99 ntBASIC0.82□□□□□ -2.28
VIMP08670 RNU6-1272P-201ENST00000362776 107 ntBASIC0.82□□□□□ -2.28
VIMP08670 Y_RNA.158-201ENST00000363651 101 ntBASIC0.82□□□□□ -2.28
VIMP08670 RNU6-1335P-201ENST00000365426 107 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms