Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RNU6-342P-201ENST00000384521 104 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 SNORA36B-201ENST00000410438 131 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 MTND4P19-201ENST00000446659 478 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 RNU6-437P-201ENST00000459408 95 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.82□□□□□ -2.28
SFTPBP07988 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.82□□□□□ -2.28
SFTPBP07988 MIR548AR-201ENST00000582191 57 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 AC131055.1-201ENST00000584626 316 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 AC007742.2-201ENST00000618226 398 ntBASIC0.82□□□□□ -2.28
SFTPBP07988 SNORD114-26-201ENST00000363543 72 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 RNU6-450P-201ENST00000364654 107 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 Y_RNA.354-201ENST00000365448 111 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 Y_RNA.395-201ENST00000383945 109 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 RNU6-102P-201ENST00000384485 104 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 SNORA26.5-201ENST00000391215 123 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 Y_RNA.602-201ENST00000410535 92 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
SFTPBP07988 RNA5SP255-201ENST00000516370 107 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 AC136628.3-201ENST00000521868 290 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 AC109810.1-201ENST00000534066 224 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 RPL23AP91-201ENST00000569211 455 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 AC087685.1-201ENST00000587507 141 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 AC005357.1-201ENST00000588399 301 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 LARP7P1-201ENST00000605576 316 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 AC008133.2-201ENST00000624540 351 ntBASIC0.81□□□□□ -2.28
SFTPBP07988 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.81□□□□□ -2.28
SFTPBP07988 SNORD113-8-201ENST00000363497 74 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 MIR570-201ENST00000384917 97 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 MIR605-201ENST00000385078 83 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 SNORD72-201ENST00000390994 80 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 MTATP6P23-201ENST00000440153 476 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 AL117351.2-201ENST00000513571 157 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 MIR4300-201ENST00000581016 96 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 AC008507.4-201ENST00000585464 127 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
SFTPBP07988 AC124312.5-201ENST00000604451 268 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 MIR376A1-201ENST00000616574 68 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 MIR4251-201ENST00000635819 61 ntBASIC0.8□□□□□ -2.28
SFTPBP07988 SNORD42.2-201ENST00000365570 69 ntBASIC0.79□□□□□ -2.28
SFTPBP07988 Y_RNA.418-201ENST00000384029 102 ntBASIC0.79□□□□□ -2.28
SFTPBP07988 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
SFTPBP07988 Y_RNA.645-201ENST00000391229 102 ntBASIC0.79□□□□□ -2.28
SFTPBP07988 MTCO2P33-201ENST00000402100 465 ntBASIC0.79□□□□□ -2.28
SFTPBP07988 SNRPGP14-201ENST00000435400 219 ntBASIC0.79□□□□□ -2.28
SFTPBP07988 RNU6-191P-201ENST00000516295 94 ntBASIC0.79□□□□□ -2.28
SFTPBP07988 MIR2681-201ENST00000581814 105 ntBASIC0.79□□□□□ -2.28
SFTPBP07988 AC023934.1-201ENST00000574529 2389 ntBASIC0.79□□□□□ -2.28
SFTPBP07988 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SFTPBP07988 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SFTPBP07988 RNU6-268P-201ENST00000364174 107 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 Y_RNA.222-201ENST00000364264 102 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 Y_RNA.445-201ENST00000384168 102 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 Y_RNA.540-201ENST00000384638 111 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SFTPBP07988 MIR1302-7-201ENST00000408841 72 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 AC022028.1-201ENST00000412054 408 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 FABP5P4-201ENST00000437203 171 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.78□□□□□ -2.28
SFTPBP07988 MIR5000-201ENST00000577717 103 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 RAC1P9-201ENST00000604990 392 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 RNU6-94P-201ENST00000607728 107 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 Pinc.1-201ENST00000616452 154 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 AC090971.5-201ENST00000621102 293 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 AL442644.1-201ENST00000454390 3105 ntBASIC0.78□□□□□ -2.28
SFTPBP07988 RNU6-674P-201ENST00000363831 107 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 RNU6-654P-201ENST00000364373 107 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 RNU6-1335P-201ENST00000365426 107 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 Y_RNA.431-201ENST00000384086 102 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 RNU6-1248P-201ENST00000391096 64 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 AL603910.2-201ENST00000407268 136 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 PMCHL1-202ENST00000423102 261 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 HSPE1P25-201ENST00000455484 251 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 Y_RNA.639-201ENST00000458981 102 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.77□□□□□ -2.29
SFTPBP07988 Y_RNA.715-201ENST00000517082 110 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 RNU7-181P-201ENST00000517234 74 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 MIR3973-201ENST00000579824 107 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 AC015726.2-201ENST00000620112 122 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 PVT1_3.1-201ENST00000620853 95 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 AC090574.1-201ENST00000623186 233 ntBASIC0.77□□□□□ -2.29
SFTPBP07988 Y_RNA.509-201ENST00000384506 99 ntBASIC0.76□□□□□ -2.29
SFTPBP07988 U8.17-201ENST00000391292 132 ntBASIC0.76□□□□□ -2.29
SFTPBP07988 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
SFTPBP07988 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.76□□□□□ -2.29
SFTPBP07988 AL035398.1-201ENST00000430869 322 ntBASIC0.76□□□□□ -2.29
SFTPBP07988 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.76□□□□□ -2.29
SFTPBP07988 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.76□□□□□ -2.29
SFTPBP07988 SNORD11-201ENST00000459124 84 ntBASIC0.76□□□□□ -2.29
SFTPBP07988 RNU6-764P-201ENST00000516396 105 ntBASIC0.76□□□□□ -2.29
SFTPBP07988 RNU6-897P-201ENST00000517135 105 ntBASIC0.76□□□□□ -2.29
SFTPBP07988 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
SFTPBP07988 AC104695.3-201ENST00000604052 296 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms