Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RPL23AP91-201ENST00000569211 455 ntBASIC0.48□□□□□ -2.33
HLA-DPB1P04440 MIR5000-201ENST00000577717 103 ntBASIC0.48□□□□□ -2.33
HLA-DPB1P04440 RPS29P30-201ENST00000600975 111 ntBASIC0.48□□□□□ -2.33
HLA-DPB1P04440 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
HLA-DPB1P04440 Y_RNA.70-201ENST00000362886 110 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 RNU4-50P-201ENST00000364361 141 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 Y_RNA.315-201ENST00000365117 102 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 RNU1-115P-201ENST00000365329 160 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 Y_RNA.383-201ENST00000383855 97 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 Y_RNA.439-201ENST00000384119 94 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 RNU6-110P-201ENST00000384508 104 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 SNORA2B-201ENST00000384583 137 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 SNORA26.5-201ENST00000391215 123 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 SNORA36B-201ENST00000410438 131 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 RNU6-733P-201ENST00000410759 104 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 SNORD11-201ENST00000459124 84 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 RNU6-437P-201ENST00000459408 95 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 RNU6-507P-201ENST00000516045 100 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 RNU6-1223P-201ENST00000517124 104 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 MIR548AO-201ENST00000579992 96 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DPB1P04440 AC087685.1-201ENST00000587507 141 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 AC005357.1-201ENST00000588399 301 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 AC015726.2-201ENST00000620112 122 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 AC112487.2-201ENST00000637950 304 ntBASIC0.47□□□□□ -2.33
HLA-DPB1P04440 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 RNY1P8-201ENST00000383970 114 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 SNORA72.4-201ENST00000384174 132 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 SNORD63-201ENST00000384262 68 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 RNY1P14-201ENST00000384426 108 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 RNU6-21P-201ENST00000384710 107 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 MIR802-201ENST00000390235 94 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 MIR1827-201ENST00000408549 66 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 RNU6-613P-201ENST00000410412 108 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 AC024067.1-201ENST00000426199 223 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 AC005534.2-201ENST00000431047 433 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 snoU13.21-201ENST00000459368 105 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 AC011195.1-201ENST00000578177 177 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 AC007742.2-201ENST00000618226 398 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 MIR6734-201ENST00000621166 68 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 MTND1P7-201ENST00000632801 297 ntBASIC0.46□□□□□ -2.34
HLA-DPB1P04440 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
HLA-DPB1P04440 RNU6-369P-201ENST00000362515 102 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 SNORD45.3-201ENST00000363836 72 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 Y_RNA.356-201ENST00000365475 113 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 AC067940.1-201ENST00000458411 300 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 U8.20-201ENST00000459445 131 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 RNU4-57P-201ENST00000515980 135 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 RNA5SP220-201ENST00000516298 104 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 AC025627.3-201ENST00000582078 182 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 AL080274.1-201ENST00000605565 220 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 AC007485.1-201ENST00000616755 206 ntBASIC0.45□□□□□ -2.34
HLA-DPB1P04440 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.44□□□□□ -2.34
HLA-DPB1P04440 RNU6-674P-201ENST00000363831 107 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 Y_RNA.418-201ENST00000384029 102 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 Y_RNA.471-201ENST00000384312 102 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 SNORA51.10-201ENST00000384418 136 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 Y_RNA.579-201ENST00000390939 94 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 POLR2KP2-201ENST00000438155 177 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 AC082651.2-201ENST00000496833 166 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 RNU6-1046P-201ENST00000516538 107 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 MIR2115-201ENST00000516657 100 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 AC040926.1-201ENST00000530195 238 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DPB1P04440 MIR4300-201ENST00000581016 96 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 MIR4791-201ENST00000607666 84 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 AC006157.1-201ENST00000611750 366 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 AC122108.2-201ENST00000611946 526 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.44□□□□□ -2.34
HLA-DPB1P04440 AL138825.1-201ENST00000618587 192 ntBASIC0.44□□□□□ -2.34
HLA-DPB1P04440 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.43□□□□□ -2.34
HLA-DPB1P04440 AC068700.1-201ENST00000565862 3754 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 RNA5SP347-201ENST00000362445 119 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 Y_RNA.168-201ENST00000363740 102 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 Y_RNA.263-201ENST00000364659 114 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HLA-DPB1P04440 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 RNU6-102P-201ENST00000384485 104 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 SNORD105-201ENST00000386910 85 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 AC015818.7-201ENST00000428754 109 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DPB1P04440 AC087499.7-201ENST00000441958 109 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 RNU2-13P-201ENST00000515909 113 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 RNU6-976P-201ENST00000516086 111 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 RNU6-191P-201ENST00000516295 94 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DPB1P04440 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DPB1P04440 SNORA4-201ENST00000584302 138 ntBASIC0.43□□□□□ -2.34
HLA-DPB1P04440 AC006441.5-201ENST00000612680 209 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms