Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.47□□□□□ -2.33
MT-ND3P03897 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
MT-ND3P03897 RNY3P11-201ENST00000364153 102 ntBASIC0.46□□□□□ -2.34
MT-ND3P03897 RNU6-177P-201ENST00000411257 104 ntBASIC0.46□□□□□ -2.34
MT-ND3P03897 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
MT-ND3P03897 RNU7-115P-201ENST00000516433 55 ntBASIC0.46□□□□□ -2.34
MT-ND3P03897 AC012433.1-201ENST00000588916 398 ntBASIC0.46□□□□□ -2.34
MT-ND3P03897 AP000753.3-201ENST00000604083 169 ntBASIC0.46□□□□□ -2.34
MT-ND3P03897 RNU6-1209P-201ENST00000363655 107 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 MIR140-201ENST00000385282 100 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 RNA5SP95-201ENST00000410319 137 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 Y_RNA.599-201ENST00000410489 109 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 PDCL2P1-201ENST00000419302 352 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 SNRPGP14-201ENST00000435400 219 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 MIR4423-201ENST00000580922 80 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 AC113139.1-201ENST00000605049 239 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 AL080274.1-201ENST00000605565 220 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 AC010205.1-201ENST00000616668 449 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 MIR548AY-201ENST00000617669 107 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 AC138305.3-201ENST00000624988 240 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 MIR924-201ENST00000638017 53 ntBASIC0.45□□□□□ -2.34
MT-ND3P03897 RNU6-268P-201ENST00000364174 107 ntBASIC0.44□□□□□ -2.34
MT-ND3P03897 Y_RNA.331-201ENST00000365267 102 ntBASIC0.44□□□□□ -2.34
MT-ND3P03897 MIR573-201ENST00000384964 99 ntBASIC0.44□□□□□ -2.34
MT-ND3P03897 MTCO2P27-201ENST00000420740 428 ntBASIC0.44□□□□□ -2.34
MT-ND3P03897 AC091951.2-201ENST00000500762 203 ntBASIC0.44□□□□□ -2.34
MT-ND3P03897 Y_RNA.772-201ENST00000606692 102 ntBASIC0.44□□□□□ -2.34
MT-ND3P03897 AC022306.2-201ENST00000617563 647 ntBASIC0.44□□□□□ -2.34
MT-ND3P03897 SNORD81.2-201ENST00000365153 76 ntBASIC0.43□□□□□ -2.34
MT-ND3P03897 RNU6-580P-201ENST00000365159 107 ntBASIC0.43□□□□□ -2.34
MT-ND3P03897 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
MT-ND3P03897 RNU6-847P-201ENST00000411115 108 ntBASIC0.43□□□□□ -2.34
MT-ND3P03897 RNU6-559P-201ENST00000516151 98 ntBASIC0.43□□□□□ -2.34
MT-ND3P03897 AC008507.4-201ENST00000585464 127 ntBASIC0.43□□□□□ -2.34
MT-ND3P03897 AC015726.2-201ENST00000620112 122 ntBASIC0.43□□□□□ -2.34
MT-ND3P03897 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 RNU6-876P-201ENST00000391295 104 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 MTCO2P33-201ENST00000402100 465 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.42□□□□□ -2.34
MT-ND3P03897 MTCO3P10-201ENST00000455912 772 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 HMGN1P10-201ENST00000474557 553 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 NDUFA4P2-201ENST00000489989 244 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 RNU6-977P-201ENST00000516411 103 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 AC011373.1-201ENST00000607270 237 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 MIR4791-201ENST00000607666 84 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 AC006441.5-201ENST00000612680 209 ntBASIC0.42□□□□□ -2.34
MT-ND3P03897 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.41□□□□□ -2.34
MT-ND3P03897 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 U8.7-201ENST00000364940 136 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 MIR570-201ENST00000384917 97 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 MT-TL1-201ENST00000386347 75 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 AL590004.1-201ENST00000405321 300 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 RNU6-437P-201ENST00000459408 95 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 AC006600.1-201ENST00000572529 153 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 MIR548AO-201ENST00000579992 96 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 MIR4264-201ENST00000583520 66 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 DEFB117-201ENST00000602356 141 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 U6atac.1-201ENST00000616025 117 ntBASIC0.41□□□□□ -2.34
MT-ND3P03897 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.4□□□□□ -2.35
MT-ND3P03897 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
MT-ND3P03897 RNU6-674P-201ENST00000363831 107 ntBASIC0.4□□□□□ -2.35
MT-ND3P03897 RNU6-934P-201ENST00000365154 107 ntBASIC0.4□□□□□ -2.35
MT-ND3P03897 RNU6-1248P-201ENST00000391096 64 ntBASIC0.4□□□□□ -2.35
MT-ND3P03897 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.4□□□□□ -2.35
MT-ND3P03897 uc_338.4-201ENST00000616635 176 ntBASIC0.4□□□□□ -2.35
MT-ND3P03897 AL138825.1-201ENST00000618587 192 ntBASIC0.4□□□□□ -2.35
MT-ND3P03897 MTND1P7-201ENST00000632801 297 ntBASIC0.4□□□□□ -2.35
MT-ND3P03897 RNA5SP325-201ENST00000363756 130 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 Y_RNA.428-201ENST00000384078 102 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 RNU6-708P-201ENST00000384217 107 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 MIR520F-201ENST00000384824 87 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 MIR559-201ENST00000385188 96 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 AF228730.4-201ENST00000421457 183 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 AC244023.1-201ENST00000426884 112 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 AC107297.1-201ENST00000459991 176 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 RNU7-110P-201ENST00000516891 62 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 RNU7-181P-201ENST00000517234 74 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 AC242498.1-201ENST00000604134 111 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
MT-ND3P03897 MIR330-201ENST00000362196 94 ntBASIC0.38□□□□□ -2.35
MT-ND3P03897 MIR520H-201ENST00000385126 88 ntBASIC0.38□□□□□ -2.35
MT-ND3P03897 AC096644.2-201ENST00000429278 159 ntBASIC0.38□□□□□ -2.35
MT-ND3P03897 Y_RNA.713-201ENST00000517013 96 ntBASIC0.38□□□□□ -2.35
MT-ND3P03897 RNU6-699P-201ENST00000517081 110 ntBASIC0.38□□□□□ -2.35
MT-ND3P03897 SNORD116.3-201ENST00000517176 78 ntBASIC0.38□□□□□ -2.35
MT-ND3P03897 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
MT-ND3P03897 Y_RNA.259-201ENST00000364619 101 ntBASIC0.37□□□□□ -2.35
MT-ND3P03897 Y_RNA.474-201ENST00000384341 102 ntBASIC0.37□□□□□ -2.35
MT-ND3P03897 SNORA36B-201ENST00000410438 131 ntBASIC0.37□□□□□ -2.35
MT-ND3P03897 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.37□□□□□ -2.35
MT-ND3P03897 RNU2-13P-201ENST00000515909 113 ntBASIC0.37□□□□□ -2.35
MT-ND3P03897 RPL23AP91-201ENST00000569211 455 ntBASIC0.37□□□□□ -2.35
MT-ND3P03897 RPS29P30-201ENST00000600975 111 ntBASIC0.37□□□□□ -2.35
MT-ND3P03897 AL121655.1-201ENST00000605811 308 ntBASIC0.37□□□□□ -2.35
MT-ND3P03897 MIR8087-201ENST00000612745 78 ntBASIC0.37□□□□□ -2.35
MT-ND3P03897 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
MT-ND3P03897 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
MT-ND3P03897 RNU6-369P-201ENST00000362515 102 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms