Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNU6-1046P-201ENST00000516538 107 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DQA1P01909 AC025627.3-201ENST00000582078 182 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 AC087685.1-201ENST00000587507 141 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
HLA-DQA1P01909 RNU1-93P-201ENST00000364704 169 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 SNORA72.4-201ENST00000384174 132 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 MIR520E-201ENST00000384867 87 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 SNORA26.5-201ENST00000391215 123 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 MIR1276-201ENST00000408707 83 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 AC236972.2-201ENST00000434979 310 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DQA1P01909 RNU6-976P-201ENST00000516086 111 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 RNU6-1110P-201ENST00000516462 101 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 AC040926.1-201ENST00000530195 238 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 MIR548AO-201ENST00000579992 96 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 AL080274.1-201ENST00000605565 220 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 MIR6504-201ENST00000613520 61 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 AC007485.1-201ENST00000616755 206 ntBASIC0.46□□□□□ -2.34
HLA-DQA1P01909 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
HLA-DQA1P01909 MIR373-201ENST00000362273 69 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 RNU6-674P-201ENST00000363831 107 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 Y_RNA.197-201ENST00000364004 102 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 RNU6-110P-201ENST00000384508 104 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 MIR802-201ENST00000390235 94 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 RNU6-1009P-201ENST00000390996 107 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 MTCO2P33-201ENST00000402100 465 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 RNU6-994P-201ENST00000410507 111 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 POLR2KP2-201ENST00000438155 177 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 SEPT14P8-201ENST00000508026 178 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 Y_RNA.676-201ENST00000516393 96 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 DEFB108E-201ENST00000524692 240 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 MIR2681-201ENST00000581814 105 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 MIR4452-201ENST00000583004 71 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 AC005357.1-201ENST00000588399 301 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 AL078603.1-201ENST00000603824 313 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 AL138825.1-201ENST00000618587 192 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 MTND1P7-201ENST00000632801 297 ntBASIC0.45□□□□□ -2.34
HLA-DQA1P01909 Y_RNA.370-201ENST00000365589 108 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 RNU6-613P-201ENST00000410412 108 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 RNU6-733P-201ENST00000410759 104 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 AC244098.3-201ENST00000424803 96 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 AC005534.2-201ENST00000431047 433 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 MTND5P20-201ENST00000448677 143 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 AC067940.1-201ENST00000458411 300 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 SNORD11-201ENST00000459124 84 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 AC098869.1-201ENST00000481627 292 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 RNU4-57P-201ENST00000515980 135 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 RNU6-191P-201ENST00000516295 94 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 CYP3A137P-201ENST00000562436 69 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 AC011195.1-201ENST00000578177 177 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 MIR4300-201ENST00000581016 96 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 MIR4795-201ENST00000584182 89 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 SNORD113-5-201ENST00000607261 78 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 MIR4791-201ENST00000607666 84 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 AC006441.5-201ENST00000612680 209 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 AC015726.2-201ENST00000620112 122 ntBASIC0.44□□□□□ -2.34
HLA-DQA1P01909 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.44□□□□□ -2.34
HLA-DQA1P01909 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
HLA-DQA1P01909 RNU4-73P-201ENST00000363164 141 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 RNU6-396P-201ENST00000365369 105 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 Y_RNA.418-201ENST00000384029 102 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 SNORA51.10-201ENST00000384418 136 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 Y_RNA.537-201ENST00000384626 109 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 RNU1-119P-201ENST00000391122 165 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 MIR1827-201ENST00000408549 66 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 snoU13.21-201ENST00000459368 105 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 MIR2115-201ENST00000516657 100 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 Y_RNA.713-201ENST00000517013 96 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DQA1P01909 AC004812.1-201ENST00000540773 146 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DQA1P01909 MIR151B-201ENST00000584249 96 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 uc_338.22-201ENST00000622722 187 ntBASIC0.43□□□□□ -2.34
HLA-DQA1P01909 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HLA-DQA1P01909 AC068700.1-201ENST00000565862 3754 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HLA-DQA1P01909 MIR1-1-201ENST00000362147 71 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 RNU6-369P-201ENST00000362515 102 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 SNORD113-8-201ENST00000363497 74 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 Y_RNA.222-201ENST00000364264 102 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 RNY3P14-201ENST00000384309 102 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 RNU6-102P-201ENST00000384485 104 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 Y_RNA.526-201ENST00000384572 110 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 RNU6-1067P-201ENST00000384752 107 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 MIR499A-201ENST00000384903 122 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 SNORD105-201ENST00000386910 85 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 MIR1302-11-201ENST00000408051 138 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 MIR1302-9-201ENST00000408365 138 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 MIR1302-10-201ENST00000408734 138 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 RNU2-13P-201ENST00000515909 113 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 RNU6-764P-201ENST00000516396 105 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 MIR548S-201ENST00000581352 82 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 AC104695.3-201ENST00000604052 296 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 MIR1302-2-201ENST00000607096 138 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
HLA-DQA1P01909 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms