Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MIR499A-201ENST00000384903 122 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 MIR938-201ENST00000401216 83 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.07□□□□□ -2.4
UPK1BO75841 AC005042.3-201ENST00000453230 174 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 AC091959.1-201ENST00000495857 238 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 RNU7-30P-201ENST00000516835 62 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 RNU7-4P-201ENST00000516961 62 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 RPL23AP91-201ENST00000569211 455 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 MIR548AY-201ENST00000617669 107 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 U6.92-201ENST00000636464 89 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 TPTEP1-208ENST00000636884 213 ntBASIC0.07□□□□□ -2.4
UPK1BO75841 RNU6-310P-201ENST00000384655 107 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 Y_RNA.570-201ENST00000384750 101 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 SNORA75.6-201ENST00000391318 127 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 Y_RNA.599-201ENST00000410489 109 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 AC096644.2-201ENST00000429278 159 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 RNU6-1132P-201ENST00000459214 107 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 AC069439.1-201ENST00000494739 167 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 AC011712.1-201ENST00000588959 234 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 AL078603.1-201ENST00000603824 313 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 AC006441.5-201ENST00000612680 209 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 AC010332.2-201ENST00000613083 1904 ntBASIC0.06□□□□□ -2.4
UPK1BO75841 RNU6-890P-201ENST00000384121 107 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 MIR628-201ENST00000385229 95 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 MIR1277-201ENST00000408536 78 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 SNORD100-201ENST00000408573 76 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 Z83846.1-201ENST00000446798 265 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 RNA5SP220-201ENST00000516298 104 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 SNORA18.4-201ENST00000516440 124 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 MIR3145-201ENST00000580727 82 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 AC002553.4-201ENST00000616896 331 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 MIR6740-201ENST00000618268 113 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 U2.1-201ENST00000618978 145 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 AC078938.1-201ENST00000620993 318 ntBASIC0.05□□□□□ -2.4
UPK1BO75841 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
UPK1BO75841 SNORD81.1-201ENST00000363064 77 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 SNORD118-201ENST00000363593 134 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 RNU6-1048P-201ENST00000364054 107 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 Y_RNA.224-201ENST00000364308 111 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 Y_RNA.314-201ENST00000365114 102 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 Y_RNA.331-201ENST00000365267 102 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 RNU6-364P-201ENST00000384387 107 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 Y_RNA.494-201ENST00000384432 111 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 RNU6-370P-201ENST00000411008 104 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 AC236972.2-201ENST00000434979 310 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 RNU7-102P-201ENST00000458948 62 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 AC090897.1-201ENST00000580909 226 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 AC134878.1-201ENST00000619901 243 ntBASIC0.04□□□□□ -2.4
UPK1BO75841 SNORA8.2-201ENST00000384372 139 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 RNU7-67P-201ENST00000459003 62 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 snoU13.16-201ENST00000459350 104 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 RNU6-437P-201ENST00000459408 95 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 RNU7-25P-201ENST00000516544 62 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 AC069113.3-201ENST00000521019 150 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 MIR3678-201ENST00000578455 94 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 MIR2681-201ENST00000581814 105 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 AC098679.4-201ENST00000624241 654 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 MIR924-201ENST00000638017 53 ntBASIC0.03□□□□□ -2.4
UPK1BO75841 RNU6-1188P-201ENST00000363795 107 ntBASIC0.02□□□□□ -2.41
UPK1BO75841 RNU6-1215P-201ENST00000384441 102 ntBASIC0.02□□□□□ -2.41
UPK1BO75841 SNORA36B-201ENST00000410438 131 ntBASIC0.02□□□□□ -2.41
UPK1BO75841 AL080274.1-201ENST00000605565 220 ntBASIC0.02□□□□□ -2.41
UPK1BO75841 AC080013.6-201ENST00000606185 215 ntBASIC0.02□□□□□ -2.41
UPK1BO75841 AC084782.3-201ENST00000612282 578 ntBASIC0.02□□□□□ -2.41
UPK1BO75841 uc_338.16-201ENST00000621804 95 ntBASIC0.02□□□□□ -2.41
UPK1BO75841 AC138305.3-201ENST00000624988 240 ntBASIC0.02□□□□□ -2.41
UPK1BO75841 Y_RNA.27-201ENST00000362540 103 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU4-50P-201ENST00000364361 141 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-42P-201ENST00000384165 107 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 Y_RNA.547-201ENST00000384654 119 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 Y_RNA.567-201ENST00000384736 106 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 MIR518F-201ENST00000384973 87 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 MIR125B2-201ENST00000385128 89 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-1319P-201ENST00000390855 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-747P-201ENST00000390928 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-241P-201ENST00000391148 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-447P-201ENST00000410293 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-1118P-201ENST00000410382 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-1076P-201ENST00000410397 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-355P-201ENST00000410427 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-791P-201ENST00000410467 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-705P-201ENST00000410601 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-1100P-201ENST00000410691 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-860P-201ENST00000410860 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-1217P-201ENST00000411276 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-785P-201ENST00000411324 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 AC024067.1-201ENST00000426199 223 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 Y_RNA.635-201ENST00000459041 101 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 SNORD11-201ENST00000459124 84 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-863P-201ENST00000515989 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU6-958P-201ENST00000516995 106 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RNU7-156P-201ENST00000517214 74 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 MIR3124-201ENST00000582636 67 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 U6.90-201ENST00000614007 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 U6.70-201ENST00000620287 104 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 MIR4315-1-201ENST00000636800 73 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 MIR4315-2-201ENST00000640925 73 ntBASIC0.01□□□□□ -2.41
UPK1BO75841 Y_RNA.241-201ENST00000364470 117 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms