Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 RNU6-1132P-201ENST00000459214 107 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.51□□□□□ -2.33
UPK3AO75631 MIR4300-201ENST00000581016 96 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 AC092447.9-201ENST00000603395 144 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 Pinc.1-201ENST00000616452 154 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 AC104985.2-201ENST00000620598 500 ntBASIC0.51□□□□□ -2.33
UPK3AO75631 RNA5SP347-201ENST00000362445 119 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 Y_RNA.39-201ENST00000362620 98 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 Y_RNA.458-201ENST00000384240 102 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 RNU6-21P-201ENST00000384710 107 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 MTND1P14-201ENST00000427400 950 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 RBMX2P4-201ENST00000441256 376 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 NDUFA4P2-201ENST00000489989 244 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 AL355375.2-201ENST00000574825 175 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 MIR5188-201ENST00000583467 113 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 UBE2V2P2-201ENST00000587677 504 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 AL080274.1-201ENST00000605565 220 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 AL132765.2-201ENST00000610812 351 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.5□□□□□ -2.33
UPK3AO75631 AC091925.1-201ENST00000623204 462 ntBASIC0.5□□□□□ -2.33
UPK3AO75631 RNU6-268P-201ENST00000364174 107 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
UPK3AO75631 RNU6-937P-201ENST00000384325 106 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 Y_RNA.496-201ENST00000384444 101 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 U8.17-201ENST00000391292 132 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 MIR1278-201ENST00000408753 81 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 AL160004.2-201ENST00000432935 350 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.49□□□□□ -2.33
UPK3AO75631 Y_RNA.632-201ENST00000459189 102 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.49□□□□□ -2.33
UPK3AO75631 MIR2115-201ENST00000516657 100 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 AC011195.1-201ENST00000578177 177 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 AL121655.1-201ENST00000605811 308 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 AC015726.2-201ENST00000620112 122 ntBASIC0.49□□□□□ -2.33
UPK3AO75631 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.49□□□□□ -2.33
UPK3AO75631 RNU6-1115P-201ENST00000362490 106 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 Y_RNA.187-201ENST00000363918 113 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 RNU6-1048P-201ENST00000364054 107 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 Y_RNA.370-201ENST00000365589 108 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 Y_RNA.439-201ENST00000384119 94 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 SNORA51.10-201ENST00000384418 136 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 Y_RNA.551-201ENST00000384661 102 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 MTCO2P33-201ENST00000402100 465 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 SNRPGP14-201ENST00000435400 219 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.48□□□□□ -2.33
UPK3AO75631 RNU6-437P-201ENST00000459408 95 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 HMGN1P10-201ENST00000474557 553 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 RNU6-830P-201ENST00000516353 107 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 RNU4-77P-201ENST00000516692 156 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 RNU7-181P-201ENST00000517234 74 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 RPL23AP91-201ENST00000569211 455 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 MIR2681-201ENST00000581814 105 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 AC008507.4-201ENST00000585464 127 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 AL138825.1-201ENST00000618587 192 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
UPK3AO75631 MIR1-1-201ENST00000362147 71 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 Y_RNA.143-201ENST00000363520 106 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 RNY1P4-201ENST00000384595 115 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 SNORD105-201ENST00000386910 85 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 SNORD72-201ENST00000390994 80 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 MIR1827-201ENST00000408549 66 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 RNU6-613P-201ENST00000410412 108 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 SNORA36B-201ENST00000410438 131 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 RNA5SP222-201ENST00000411039 105 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.47□□□□□ -2.33
UPK3AO75631 AL606534.2-204ENST00000635008 178 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
UPK3AO75631 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.46□□□□□ -2.34
UPK3AO75631 RNU4-80P-201ENST00000363200 141 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 RNU6-396P-201ENST00000365369 105 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 SNORA36.2-201ENST00000384004 127 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 AC244098.3-201ENST00000424803 96 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 POLR2KP2-201ENST00000438155 177 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 RNU7-152P-201ENST00000458982 64 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 RNU7-141P-201ENST00000459304 62 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 U8.20-201ENST00000459445 131 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 SNORD19B-201ENST00000459623 84 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 RNA5SP436-201ENST00000516020 115 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.46□□□□□ -2.34
UPK3AO75631 MIR548AO-201ENST00000579992 96 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 AL512605.2-201ENST00000592972 256 ntBASIC0.46□□□□□ -2.34
UPK3AO75631 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.46□□□□□ -2.34
UPK3AO75631 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
UPK3AO75631 Y_RNA.70-201ENST00000362886 110 ntBASIC0.45□□□□□ -2.34
UPK3AO75631 Y_RNA.80-201ENST00000362996 102 ntBASIC0.45□□□□□ -2.34
UPK3AO75631 SNORA72.1-201ENST00000363485 129 ntBASIC0.45□□□□□ -2.34
UPK3AO75631 SNORD114-23-201ENST00000363536 72 ntBASIC0.45□□□□□ -2.34
UPK3AO75631 Y_RNA.168-201ENST00000363740 102 ntBASIC0.45□□□□□ -2.34
UPK3AO75631 RNY3-201ENST00000365484 102 ntBASIC0.45□□□□□ -2.34
UPK3AO75631 Y_RNA.383-201ENST00000383855 97 ntBASIC0.45□□□□□ -2.34
UPK3AO75631 SNORD63-201ENST00000384262 68 ntBASIC0.45□□□□□ -2.34
UPK3AO75631 Y_RNA.485-201ENST00000384395 102 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms