Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.77□□□□□ -2.53
USH2AO75445 AL159153.1-201ENST00000619688 317 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 MIR20A-201ENST00000362279 71 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 MIR516B2-201ENST00000385190 85 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 RNA5SP390-201ENST00000410191 113 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 AL031274.1-201ENST00000450334 232 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 RNU6-202P-201ENST00000515998 96 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 DPPA3P3-201ENST00000603842 430 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.78□□□□□ -2.53
USH2AO75445 RNU6-924P-201ENST00000362926 108 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 RNU6-417P-201ENST00000384712 107 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 MIR652-201ENST00000385278 98 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 CCDC58P2-201ENST00000417131 366 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.78□□□□□ -2.53
USH2AO75445 MIR4473-201ENST00000583731 91 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 MIR4753-201ENST00000585119 83 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 BNIP3P40-201ENST00000596017 556 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 MIR548AY-201ENST00000617669 107 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 AP003400.6-201ENST00000624698 740 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 RNU6-824P-201ENST00000363724 104 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 RNU6-740P-201ENST00000364734 105 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 SNORA40C-201ENST00000391285 128 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.78□□□□□ -2.53
USH2AO75445 RNU6-781P-201ENST00000516377 101 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 AC090960.1-201ENST00000421072 306 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 PSMA6P3-201ENST00000428242 164 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 HSPE1P25-201ENST00000455484 251 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 TPTEP1-208ENST00000636884 213 ntBASIC-0.78□□□□□ -2.53
USH2AO75445 AL445523.1-201ENST00000451184 1362 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.79□□□□□ -2.54
USH2AO75445 RNU6-865P-201ENST00000364772 107 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 RNU6-476P-201ENST00000384726 107 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 RNU6-376P-201ENST00000384731 106 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 MIR1185-2-201ENST00000408687 86 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.79□□□□□ -2.54
USH2AO75445 RNA5SP245-201ENST00000364239 121 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 SNORD115-31-201ENST00000365318 82 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
USH2AO75445 AC091951.3-201ENST00000504093 246 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 AC069113.1-201ENST00000517763 267 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 SNORA59B-202ENST00000578183 701 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 AC138649.3-201ENST00000622154 254 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 AC013470.1-201ENST00000453438 462 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 RNU6-416P-201ENST00000516265 103 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 AL022154.1-201ENST00000604698 785 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 MIR6740-201ENST00000618268 113 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 RNY3P3-201ENST00000363816 102 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 RNU6-98P-201ENST00000384173 107 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 RNU6-154P-201ENST00000384306 106 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 AC020550.1-201ENST00000447385 163 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 BNIP3P9-201ENST00000603714 553 ntBASIC-0.79□□□□□ -2.54
USH2AO75445 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 MTCO2P16-201ENST00000436962 677 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 MTCO1P31-201ENST00000506355 492 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 RNU6-188P-201ENST00000364207 107 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 RNU4-75P-201ENST00000364621 146 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 RNU6-658P-201ENST00000384606 106 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 MTATP6P17-201ENST00000431030 672 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 AC010608.3-201ENST00000625048 527 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 RNU1-115P-201ENST00000365329 160 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 MIR617-201ENST00000385030 97 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 RMST_5.1-201ENST00000618704 126 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Z97988.1-201ENST00000637697 135 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 RNU6-454P-201ENST00000364292 107 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.8□□□□□ -2.54
USH2AO75445 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.8□□□□□ -2.54
USH2AO75445 MIR30D-201ENST00000362283 70 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms