Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 RNU6-163P-201ENST00000384396 106 ntBASIC1.79□□□□□ -2.12
NCK2O43639 Y_RNA.590-201ENST00000410140 107 ntBASIC1.79□□□□□ -2.12
NCK2O43639 RNU2-38P-201ENST00000410856 79 ntBASIC1.79□□□□□ -2.12
NCK2O43639 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.79□□□□□ -2.12
NCK2O43639 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
NCK2O43639 MIR4503-201ENST00000582187 83 ntBASIC1.79□□□□□ -2.12
NCK2O43639 MIR3149-201ENST00000584629 83 ntBASIC1.79□□□□□ -2.12
NCK2O43639 Y_RNA.802-201ENST00000614892 130 ntBASIC1.79□□□□□ -2.12
NCK2O43639 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NCK2O43639 RNU6-1209P-201ENST00000363655 107 ntBASIC1.78□□□□□ -2.12
NCK2O43639 Y_RNA.336-201ENST00000365307 109 ntBASIC1.78□□□□□ -2.12
NCK2O43639 RNA5SP259-201ENST00000365541 109 ntBASIC1.78□□□□□ -2.12
NCK2O43639 Y_RNA.416-201ENST00000384014 113 ntBASIC1.78□□□□□ -2.12
NCK2O43639 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.78□□□□□ -2.12
NCK2O43639 RNU6-1084P-201ENST00000362498 107 ntBASIC1.77□□□□□ -2.13
NCK2O43639 Y_RNA.293-201ENST00000364908 93 ntBASIC1.77□□□□□ -2.13
NCK2O43639 RNU6-42P-201ENST00000384165 107 ntBASIC1.77□□□□□ -2.13
NCK2O43639 MIR452-201ENST00000385020 85 ntBASIC1.77□□□□□ -2.13
NCK2O43639 AL603910.2-201ENST00000407268 136 ntBASIC1.77□□□□□ -2.13
NCK2O43639 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.77□□□□□ -2.13
NCK2O43639 SNX2P2-201ENST00000424553 323 ntBASIC1.77□□□□□ -2.13
NCK2O43639 AC027119.1-201ENST00000440877 241 ntBASIC1.77□□□□□ -2.13
NCK2O43639 Y_RNA.679-201ENST00000516416 91 ntBASIC1.77□□□□□ -2.13
NCK2O43639 SUMO2P16-201ENST00000519475 264 ntBASIC1.77□□□□□ -2.13
NCK2O43639 Y_RNA.191-201ENST00000363972 113 ntBASIC1.76□□□□□ -2.13
NCK2O43639 SNORA2.2-201ENST00000365473 135 ntBASIC1.76□□□□□ -2.13
NCK2O43639 SNORA8.3-201ENST00000384679 139 ntBASIC1.76□□□□□ -2.13
NCK2O43639 RN7SKP101-201ENST00000411376 320 ntBASIC1.76□□□□□ -2.13
NCK2O43639 MLLT10P1-201ENST00000418346 262 ntBASIC1.76□□□□□ -2.13
NCK2O43639 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.76□□□□□ -2.13
NCK2O43639 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.76□□□□□ -2.13
NCK2O43639 RNU6-322P-201ENST00000516010 103 ntBASIC1.76□□□□□ -2.13
NCK2O43639 AL513534.2-201ENST00000603836 250 ntBASIC1.76□□□□□ -2.13
NCK2O43639 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.76□□□□□ -2.13
NCK2O43639 Y_RNA.20-201ENST00000362479 113 ntBASIC1.75□□□□□ -2.13
NCK2O43639 SNORA7.1-201ENST00000363750 139 ntBASIC1.75□□□□□ -2.13
NCK2O43639 RNU6-60P-201ENST00000364792 103 ntBASIC1.75□□□□□ -2.13
NCK2O43639 MIR517C-201ENST00000385103 95 ntBASIC1.75□□□□□ -2.13
NCK2O43639 MIR653-201ENST00000385279 96 ntBASIC1.75□□□□□ -2.13
NCK2O43639 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
NCK2O43639 SNORD58.1-201ENST00000391313 66 ntBASIC1.75□□□□□ -2.13
NCK2O43639 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.75□□□□□ -2.13
NCK2O43639 RN7SKP51-201ENST00000410781 304 ntBASIC1.75□□□□□ -2.13
NCK2O43639 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.75□□□□□ -2.13
NCK2O43639 AC114811.1-201ENST00000507207 168 ntBASIC1.75□□□□□ -2.13
NCK2O43639 SNORD45.4-201ENST00000516629 73 ntBASIC1.75□□□□□ -2.13
NCK2O43639 RNU6-126P-201ENST00000516685 103 ntBASIC1.75□□□□□ -2.13
NCK2O43639 RPL23AP91-201ENST00000569211 455 ntBASIC1.75□□□□□ -2.13
NCK2O43639 MIR4285-201ENST00000581001 85 ntBASIC1.75□□□□□ -2.13
NCK2O43639 AC006006.1-201ENST00000603082 144 ntBASIC1.75□□□□□ -2.13
NCK2O43639 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
NCK2O43639 Y_RNA.117-201ENST00000363294 101 ntBASIC1.74□□□□□ -2.13
NCK2O43639 SNORD14E-201ENST00000364009 85 ntBASIC1.74□□□□□ -2.13
NCK2O43639 MIR15B-201ENST00000385045 98 ntBASIC1.74□□□□□ -2.13
NCK2O43639 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.74□□□□□ -2.13
NCK2O43639 SNORD11-201ENST00000459124 84 ntBASIC1.74□□□□□ -2.13
NCK2O43639 RPL30P7-201ENST00000479312 323 ntBASIC1.74□□□□□ -2.13
NCK2O43639 RNU6-902P-201ENST00000517212 91 ntBASIC1.74□□□□□ -2.13
NCK2O43639 AC090049.2-201ENST00000550377 109 ntBASIC1.74□□□□□ -2.13
NCK2O43639 MIR4778-201ENST00000577635 80 ntBASIC1.74□□□□□ -2.13
NCK2O43639 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NCK2O43639 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
NCK2O43639 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NCK2O43639 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.73□□□□□ -2.13
NCK2O43639 Y_RNA.54-201ENST00000362766 105 ntBASIC1.73□□□□□ -2.13
NCK2O43639 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
NCK2O43639 Y_RNA.304-201ENST00000365011 112 ntBASIC1.73□□□□□ -2.13
NCK2O43639 RNU6-442P-201ENST00000383968 104 ntBASIC1.73□□□□□ -2.13
NCK2O43639 Y_RNA.618-201ENST00000410949 107 ntBASIC1.73□□□□□ -2.13
NCK2O43639 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.73□□□□□ -2.13
NCK2O43639 RNU6-1023P-201ENST00000516137 106 ntBASIC1.73□□□□□ -2.13
NCK2O43639 RNA5SP220-201ENST00000516298 104 ntBASIC1.73□□□□□ -2.13
NCK2O43639 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
NCK2O43639 MIR4452-201ENST00000583004 71 ntBASIC1.73□□□□□ -2.13
NCK2O43639 AL021707.8-201ENST00000609428 183 ntBASIC1.73□□□□□ -2.13
NCK2O43639 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NCK2O43639 ZNF209P-201ENST00000593450 2304 ntBASIC1.73□□□□□ -2.13
NCK2O43639 SNORD50B-201ENST00000364995 70 ntBASIC1.72□□□□□ -2.13
NCK2O43639 MIR802-201ENST00000390235 94 ntBASIC1.72□□□□□ -2.13
NCK2O43639 RNU1-123P-201ENST00000458950 160 ntBASIC1.72□□□□□ -2.13
NCK2O43639 COX6CP14-201ENST00000469580 174 ntBASIC1.72□□□□□ -2.13
NCK2O43639 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.72□□□□□ -2.13
NCK2O43639 AC100767.1-201ENST00000528178 123 ntBASIC1.72□□□□□ -2.13
NCK2O43639 MIR4662B-201ENST00000579498 81 ntBASIC1.72□□□□□ -2.13
NCK2O43639 AC008507.4-201ENST00000585464 127 ntBASIC1.72□□□□□ -2.13
NCK2O43639 AL442067.1-201ENST00000613261 223 ntBASIC1.72□□□□□ -2.13
NCK2O43639 AL121890.5-201ENST00000620848 304 ntBASIC1.72□□□□□ -2.13
NCK2O43639 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NCK2O43639 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NCK2O43639 Y_RNA.401-201ENST00000383965 117 ntBASIC1.71□□□□□ -2.14
NCK2O43639 MIR626-201ENST00000385032 94 ntBASIC1.71□□□□□ -2.14
NCK2O43639 PIGPP3-201ENST00000425307 415 ntBASIC1.71□□□□□ -2.14
NCK2O43639 NDUFA4P2-201ENST00000489989 244 ntBASIC1.71□□□□□ -2.14
NCK2O43639 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.71□□□□□ -2.14
NCK2O43639 AL357312.1-201ENST00000603879 298 ntBASIC1.71□□□□□ -2.14
NCK2O43639 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NCK2O43639 Y_RNA.262-201ENST00000364641 102 ntBASIC1.7□□□□□ -2.14
NCK2O43639 Y_RNA.277-201ENST00000364754 102 ntBASIC1.7□□□□□ -2.14
NCK2O43639 RNY3P5-201ENST00000384127 102 ntBASIC1.7□□□□□ -2.14
NCK2O43639 AL451046.2-201ENST00000403074 277 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms