Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL591806.2-201ENST00000433122 173 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 RNU7-107P-201ENST00000459121 61 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 AC018868.1-201ENST00000491307 315 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 RNU6-659P-201ENST00000516454 104 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 RNU6-1096P-201ENST00000517089 102 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 RNU6-667P-201ENST00000517186 102 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.93□□□□□ -2.1
SMAD6O43541 MIR2681-201ENST00000581814 105 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 AC073413.2-201ENST00000604332 360 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 AC022202.1-201ENST00000613515 211 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
SMAD6O43541 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SMAD6O43541 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
SMAD6O43541 SNORA25.7-201ENST00000364375 127 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 Y_RNA.634-201ENST00000364811 113 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 SNORA25B-201ENST00000365507 128 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 RNU6-44P-201ENST00000384045 107 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 MIR562-201ENST00000384894 95 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 RNU6-1186P-201ENST00000410429 97 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 RNU2-70P-201ENST00000410718 179 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.92□□□□□ -2.1
SMAD6O43541 AC011406.1-201ENST00000512440 370 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 RNA5SP153-201ENST00000516498 76 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 AC080100.1-201ENST00000624239 5356 ntBASIC1.92□□□□□ -2.1
SMAD6O43541 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.92□□□□□ -2.1
SMAD6O43541 snoU2-30.2-201ENST00000362805 70 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 RNU1-96P-201ENST00000364163 162 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 Y_RNA.621-201ENST00000411065 96 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 AC023449.1-201ENST00000454464 154 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.91□□□□□ -2.1
SMAD6O43541 RNA5SP182-201ENST00000516064 82 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 RNU6-1041P-201ENST00000516254 102 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 RNU7-149P-201ENST00000516739 59 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 RNU7-128P-201ENST00000517247 62 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
SMAD6O43541 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
SMAD6O43541 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SMAD6O43541 RNU6-235P-201ENST00000362644 107 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 U8.1-201ENST00000362843 134 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 MIR518A2-201ENST00000384966 87 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 RNA5SP467-201ENST00000391274 118 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 OR9P1P-201ENST00000496431 281 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 RPS29P11-201ENST00000496507 171 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 RPL23AP63-201ENST00000498752 471 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 RNU6-1146P-201ENST00000516282 102 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 RNU6-1291P-201ENST00000516591 104 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.9□□□□□ -2.11
SMAD6O43541 AC097639.2-201ENST00000603159 172 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.9□□□□□ -2.11
SMAD6O43541 JPX_2.1-201ENST00000614161 69 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 Pinc.1-201ENST00000616452 154 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.9□□□□□ -2.11
SMAD6O43541 AL391516.1-201ENST00000554380 2449 ntBASIC1.9□□□□□ -2.11
SMAD6O43541 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMAD6O43541 SNORA33-201ENST00000363664 130 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 SNORD114-6-201ENST00000364393 72 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 RNU6-1325P-201ENST00000364905 105 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 Y_RNA.486-201ENST00000384398 107 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 MIR520G-201ENST00000385064 90 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 AL035461.1-201ENST00000421490 332 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 AC233266.1-201ENST00000454518 96 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 NDUFA4P2-201ENST00000489989 244 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 RNU7-99P-201ENST00000516271 62 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 AC091178.2-201ENST00000584401 117 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 AC242852.1-201ENST00000612151 96 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
SMAD6O43541 AC244015.1-201ENST00000622301 99 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 U6.108-201ENST00000637764 58 ntBASIC1.89□□□□□ -2.11
SMAD6O43541 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMAD6O43541 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
SMAD6O43541 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMAD6O43541 RNU6-1138P-201ENST00000365359 106 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 Y_RNA.563-201ENST00000384707 108 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.88□□□□□ -2.11
SMAD6O43541 snoU13.23-201ENST00000458863 104 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.88□□□□□ -2.11
SMAD6O43541 RNU6-919P-201ENST00000516731 104 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 AC090049.2-201ENST00000550377 109 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 Y_RNA.757-201ENST00000578934 114 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.88□□□□□ -2.11
SMAD6O43541 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMAD6O43541 Y_RNA.120-201ENST00000363304 110 ntBASIC1.87□□□□□ -2.11
SMAD6O43541 Y_RNA.253-201ENST00000364562 112 ntBASIC1.87□□□□□ -2.11
SMAD6O43541 SNORA12.1-201ENST00000390873 148 ntBASIC1.87□□□□□ -2.11
SMAD6O43541 SNORA26.9-201ENST00000391322 122 ntBASIC1.87□□□□□ -2.11
SMAD6O43541 SRIP3-201ENST00000413200 219 ntBASIC1.87□□□□□ -2.11
SMAD6O43541 MLLT10P1-201ENST00000418346 262 ntBASIC1.87□□□□□ -2.11
SMAD6O43541 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
SMAD6O43541 RN7SKP179-201ENST00000516126 217 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms