Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNU7-181P-201ENST00000517234 74 ntBASIC0.2□□□□□ -2.38
CLOCKO15516 RN7SKP295-201ENST00000517264 153 ntBASIC0.2□□□□□ -2.38
CLOCKO15516 AC024405.2-202ENST00000532731 184 ntBASIC0.2□□□□□ -2.38
CLOCKO15516 AC080013.6-201ENST00000606185 215 ntBASIC0.2□□□□□ -2.38
CLOCKO15516 AC011476.5-201ENST00000615594 130 ntBASIC0.2□□□□□ -2.38
CLOCKO15516 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.2□□□□□ -2.38
CLOCKO15516 Y_RNA.85-201ENST00000363014 111 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 RNU6-205P-201ENST00000390858 107 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 SNORA75.6-201ENST00000391318 127 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 MTCO2P33-201ENST00000402100 465 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 RNU6-847P-201ENST00000411115 108 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 RPL23AP54-201ENST00000495129 419 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 MIR4771-2-201ENST00000577758 74 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 MIR4804-201ENST00000581683 73 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 MIR4771-1-201ENST00000582617 74 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 MIR5188-201ENST00000583467 113 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 MIR4264-201ENST00000583520 66 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
CLOCKO15516 uc_338.4-201ENST00000616635 176 ntBASIC0.19□□□□□ -2.38
CLOCKO15516 MIR548F1-201ENST00000408667 84 ntBASIC0.18□□□□□ -2.38
CLOCKO15516 Y_RNA.605-201ENST00000410577 105 ntBASIC0.18□□□□□ -2.38
CLOCKO15516 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.18□□□□□ -2.38
CLOCKO15516 AC005042.3-201ENST00000453230 174 ntBASIC0.18□□□□□ -2.38
CLOCKO15516 RNU7-169P-201ENST00000459456 61 ntBASIC0.18□□□□□ -2.38
CLOCKO15516 RNU6-718P-201ENST00000516166 105 ntBASIC0.18□□□□□ -2.38
CLOCKO15516 AC127455.1-201ENST00000565496 145 ntBASIC0.18□□□□□ -2.38
CLOCKO15516 AC008507.4-201ENST00000585464 127 ntBASIC0.18□□□□□ -2.38
CLOCKO15516 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
CLOCKO15516 LARP7P1-201ENST00000605576 316 ntBASIC0.18□□□□□ -2.38
CLOCKO15516 RNU6-1175P-201ENST00000365200 107 ntBASIC0.17□□□□□ -2.38
CLOCKO15516 RNU6-125P-201ENST00000384505 107 ntBASIC0.17□□□□□ -2.38
CLOCKO15516 RNA5SP127-201ENST00000411051 133 ntBASIC0.17□□□□□ -2.38
CLOCKO15516 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.17□□□□□ -2.38
CLOCKO15516 RNU2-13P-201ENST00000515909 113 ntBASIC0.17□□□□□ -2.38
CLOCKO15516 RNU7-115P-201ENST00000516433 55 ntBASIC0.17□□□□□ -2.38
CLOCKO15516 RNU7-30P-201ENST00000516835 62 ntBASIC0.17□□□□□ -2.38
CLOCKO15516 MIR2681-201ENST00000581814 105 ntBASIC0.17□□□□□ -2.38
CLOCKO15516 AC006441.5-201ENST00000612680 209 ntBASIC0.17□□□□□ -2.38
CLOCKO15516 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
CLOCKO15516 MIR103A1-201ENST00000362165 78 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 SNORD44.1-201ENST00000363202 61 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 Y_RNA.242-201ENST00000364473 110 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 Y_RNA.570-201ENST00000384750 101 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 Y_RNA.646-201ENST00000410980 101 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.16□□□□□ -2.38
CLOCKO15516 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.16□□□□□ -2.38
CLOCKO15516 RNU7-56P-201ENST00000458744 62 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 AC091951.2-201ENST00000500762 203 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 RNU6-911P-201ENST00000516523 104 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 RNU6-1007P-201ENST00000516586 107 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 MIR4676-201ENST00000583078 72 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 TPTEP1-208ENST00000636884 213 ntBASIC0.16□□□□□ -2.38
CLOCKO15516 RNY3P11-201ENST00000364153 102 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 U8.7-201ENST00000364940 136 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 RNU6-1215P-201ENST00000384441 102 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 RNU6-679P-201ENST00000391003 106 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 AL590004.1-201ENST00000405321 300 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 RNU4-14P-201ENST00000410858 122 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 AC024067.1-201ENST00000426199 223 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 AC015818.7-201ENST00000428754 109 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 AC087499.7-201ENST00000441958 109 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 Y_RNA.635-201ENST00000459041 101 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 SNORA25.12-201ENST00000516202 82 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 AC022523.2-201ENST00000561045 150 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.15□□□□□ -2.39
CLOCKO15516 U2.1-201ENST00000618978 145 ntBASIC0.15□□□□□ -2.39
CLOCKO15516 Y_RNA.27-201ENST00000362540 103 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 RNU6-310P-201ENST00000384655 107 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 MIR518A1-201ENST00000385068 85 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 MIR628-201ENST00000385229 95 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 RNA5SP63-201ENST00000391225 112 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 SNORA40.8-201ENST00000411034 126 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 AF228730.4-201ENST00000421457 183 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 RNU6-358P-201ENST00000516564 75 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 MIR5690-201ENST00000583739 73 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 AC020891.4-201ENST00000605745 93 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 MIR548AY-201ENST00000617669 107 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 AC098679.4-201ENST00000624241 654 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 U6.92-201ENST00000636464 89 ntBASIC0.14□□□□□ -2.39
CLOCKO15516 RNU6-1188P-201ENST00000363795 107 ntBASIC0.13□□□□□ -2.39
CLOCKO15516 RNA5SP517-201ENST00000364724 117 ntBASIC0.13□□□□□ -2.39
CLOCKO15516 SNORD72-201ENST00000390994 80 ntBASIC0.13□□□□□ -2.39
CLOCKO15516 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
CLOCKO15516 SNRPGP12-201ENST00000449481 213 ntBASIC0.13□□□□□ -2.39
CLOCKO15516 Y_RNA.691-201ENST00000516611 103 ntBASIC0.13□□□□□ -2.39
CLOCKO15516 MIR4423-201ENST00000580922 80 ntBASIC0.13□□□□□ -2.39
CLOCKO15516 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CLOCKO15516 RNU6-890P-201ENST00000384121 107 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 MIR938-201ENST00000401216 83 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 AL603910.2-201ENST00000407268 136 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 Y_RNA.599-201ENST00000410489 109 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 RNU6-370P-201ENST00000411008 104 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 SNORD71-201ENST00000411292 86 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.12□□□□□ -2.39
CLOCKO15516 AL589823.1-201ENST00000429577 183 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 snoU13.16-201ENST00000459350 104 ntBASIC0.12□□□□□ -2.39
CLOCKO15516 AC069439.1-201ENST00000494739 167 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms