Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 Y_RNA.128-201ENST00000363391 112 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 Y_RNA.238-201ENST00000364441 102 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 SNORA25.9-201ENST00000365087 128 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 RNU6-969P-201ENST00000383900 105 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 Y_RNA.418-201ENST00000384029 102 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 RNU6-102P-201ENST00000384485 104 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 SNORD115-46-201ENST00000390982 71 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 SNORA26.5-201ENST00000391215 123 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 NDUFA4P2-201ENST00000489989 244 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.83□□□□□ -2.28
PDLIM1O00151 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 MTND4P29-201ENST00000503122 1372 ntBASIC0.83□□□□□ -2.28
PDLIM1O00151 RNU6-674P-201ENST00000363831 107 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 RNU6-899P-201ENST00000363947 107 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 Y_RNA.222-201ENST00000364264 102 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 MIR499A-201ENST00000384903 122 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 RNU6-496P-201ENST00000516145 99 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 RNU6-113P-201ENST00000516653 101 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 AC005357.1-201ENST00000588399 301 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 AL512605.2-201ENST00000592972 256 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
PDLIM1O00151 Y_RNA.61-201ENST00000362835 102 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 AC023449.1-201ENST00000454464 154 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 HSPE1P25-201ENST00000455484 251 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 MRPS35P2-201ENST00000508242 191 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 RNY3P15-201ENST00000516297 97 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 RNU6-764P-201ENST00000516396 105 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 Pinc.1-201ENST00000616452 154 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 AC134503.1-201ENST00000633048 54 ntBASIC0.81□□□□□ -2.28
PDLIM1O00151 Y_RNA.136-201ENST00000363444 102 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 RNU6-1205P-201ENST00000363625 106 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 RNA5SP48-201ENST00000363969 126 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 Y_RNA.380-201ENST00000365663 111 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 SNORA22B-201ENST00000383876 138 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 RNU6-1067P-201ENST00000384752 107 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 RNU6-763P-201ENST00000390865 106 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 MTCO2P12-201ENST00000427426 682 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.8□□□□□ -2.28
PDLIM1O00151 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 MIR548AR-201ENST00000582191 57 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 AC008507.4-201ENST00000585464 127 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.8□□□□□ -2.28
PDLIM1O00151 SEPT14P17-201ENST00000617978 177 ntBASIC0.8□□□□□ -2.28
PDLIM1O00151 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.8□□□□□ -2.28
PDLIM1O00151 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 RNU6-268P-201ENST00000364174 107 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 Y_RNA.226-201ENST00000364337 114 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 Y_RNA.242-201ENST00000364473 110 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 Y_RNA.394-201ENST00000383942 103 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 Y_RNA.535-201ENST00000384612 99 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 SNORD72-201ENST00000390994 80 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 U8.17-201ENST00000391292 132 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.79□□□□□ -2.28
PDLIM1O00151 MTCO1P5-201ENST00000433573 344 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 AL020996.3-201ENST00000606617 222 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 AC037487.3-201ENST00000606668 112 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 AC008133.2-201ENST00000624540 351 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 MIR4251-201ENST00000635819 61 ntBASIC0.79□□□□□ -2.28
PDLIM1O00151 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 Y_RNA.19-201ENST00000362462 99 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 Y_RNA.105-201ENST00000363182 111 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 Y_RNA.138-201ENST00000363462 102 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 RNU6-770P-201ENST00000363929 105 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 RNU6-144P-201ENST00000383951 107 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 RNU6-514P-201ENST00000384208 107 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 Y_RNA.527-201ENST00000384573 102 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 SNORD28B-201ENST00000390993 75 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 Y_RNA.581-201ENST00000391017 97 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 SNORA53-201ENST00000391141 249 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 MIR1185-1-201ENST00000408598 86 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 AC098869.1-201ENST00000481627 292 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 AP003716.2-201ENST00000528260 108 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 AC015726.2-201ENST00000620112 122 ntBASIC0.78□□□□□ -2.28
PDLIM1O00151 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
PDLIM1O00151 SNORA25.1-201ENST00000362326 128 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 Y_RNA.14-201ENST00000362415 103 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 Y_RNA.152-201ENST00000363578 100 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 Y_RNA.158-201ENST00000363651 101 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 Y_RNA.191-201ENST00000363972 113 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 Y_RNA.210-201ENST00000364161 110 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 RNU6-290P-201ENST00000365212 101 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 Y_RNA.455-201ENST00000384230 98 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 MIR570-201ENST00000384917 97 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 MIR548P-201ENST00000408336 84 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
PDLIM1O00151 ELOCP20-201ENST00000422460 345 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms