Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 Y_RNA.26-201ENST00000362539 101 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.64-201ENST00000362845 102 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.152-201ENST00000363578 100 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 RNU6-899P-201ENST00000363947 107 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 RNU6-290P-201ENST00000365212 101 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 RNU6-969P-201ENST00000383900 105 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 Y_RNA.541-201ENST00000384640 113 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 RPS29P29-201ENST00000456396 171 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 NDUFA4P2-201ENST00000489989 244 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
NPIPA3F8WFD2 SNORA53-201ENST00000391141 249 ntBASIC1.03□□□□□ -2.24
NPIPA3F8WFD2 snoU13.25-201ENST00000458945 104 ntBASIC1.03□□□□□ -2.24
NPIPA3F8WFD2 RNU2-31P-201ENST00000516954 155 ntBASIC1.03□□□□□ -2.24
NPIPA3F8WFD2 AC044792.1-201ENST00000593294 196 ntBASIC1.03□□□□□ -2.24
NPIPA3F8WFD2 AL078603.1-201ENST00000603824 313 ntBASIC1.03□□□□□ -2.24
NPIPA3F8WFD2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NPIPA3F8WFD2 SNORA25.1-201ENST00000362326 128 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 Y_RNA.153-201ENST00000363615 91 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 RNU6-1205P-201ENST00000363625 106 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 RNU6-674P-201ENST00000363831 107 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 SNORA33.2-201ENST00000365413 134 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 RNU6-442P-201ENST00000383968 104 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 RNU6-514P-201ENST00000384208 107 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 AL591704.2-201ENST00000421658 181 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 AC005534.2-201ENST00000431047 433 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 MTCYBP6-201ENST00000441810 138 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 SNORD79.1-201ENST00000516069 84 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 AP003733.2-201ENST00000529409 171 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 MIR4764-201ENST00000580680 88 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 AC087685.1-201ENST00000587507 141 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 AC037487.3-201ENST00000606668 112 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 MIR7111-201ENST00000619751 72 ntBASIC1.02□□□□□ -2.25
NPIPA3F8WFD2 RNU1-124P-201ENST00000363861 145 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 Y_RNA.276-201ENST00000364732 109 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 RNU6-662P-201ENST00000384253 104 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 SNORD38C-201ENST00000384381 69 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 MIR15B-201ENST00000385045 98 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 AC002429.1-201ENST00000437672 148 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 AC245047.8-201ENST00000456455 284 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 Y_RNA.637-201ENST00000459424 114 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 SNORD123-201ENST00000459473 70 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 RNU7-41P-201ENST00000515917 61 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 AL391903.3-201ENST00000612158 163 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 AL391516.1-201ENST00000554380 2449 ntBASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
NPIPA3F8WFD2 Y_RNA.11-201ENST00000362375 109 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 Y_RNA.16-201ENST00000362421 102 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 SNORA25.3-201ENST00000363205 127 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 RNU6-326P-201ENST00000365480 107 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 RNU6-639P-201ENST00000384074 107 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 SNORD72-201ENST00000390994 80 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 RNU6-985P-201ENST00000410182 104 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 RNU6-383P-201ENST00000410864 94 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
NPIPA3F8WFD2 RPS26P48-201ENST00000491713 339 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 AC091959.1-201ENST00000495857 238 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 RNU6-1143P-201ENST00000516125 104 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1□□□□□ -2.25
NPIPA3F8WFD2 SNORA4-201ENST00000584302 138 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 AC008507.4-201ENST00000585464 127 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 AC013791.1-201ENST00000616619 62 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 AC008163.1-202ENST00000636004 2889 ntBASIC1□□□□□ -2.25
NPIPA3F8WFD2 RNU6-268P-201ENST00000364174 107 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 RNU6-144P-201ENST00000383951 107 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 RNU6-1227P-201ENST00000383981 107 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 SNORA75.2-201ENST00000391138 150 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 SNORA75.3-201ENST00000391231 150 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 BTF3P11-201ENST00000426582 477 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 MTND4LP30-201ENST00000454092 297 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 MTND5P22-201ENST00000458380 195 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 SNORD11-201ENST00000459124 84 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 RNU6-1007P-201ENST00000516586 107 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 MIR6734-201ENST00000621166 68 ntBASIC0.99□□□□□ -2.25
NPIPA3F8WFD2 RNA5SP264-201ENST00000363115 107 ntBASIC0.98□□□□□ -2.25
NPIPA3F8WFD2 RNU1-93P-201ENST00000364704 169 ntBASIC0.98□□□□□ -2.25
NPIPA3F8WFD2 SNORD12-201ENST00000391002 90 ntBASIC0.98□□□□□ -2.25
NPIPA3F8WFD2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.98□□□□□ -2.25
NPIPA3F8WFD2 RNA5SP220-201ENST00000516298 104 ntBASIC0.98□□□□□ -2.25
NPIPA3F8WFD2 RNU7-43P-201ENST00000516554 64 ntBASIC0.98□□□□□ -2.25
NPIPA3F8WFD2 SCARNA24.2-201ENST00000516968 130 ntBASIC0.98□□□□□ -2.25
NPIPA3F8WFD2 MIR5692C2-201ENST00000577959 77 ntBASIC0.98□□□□□ -2.25
NPIPA3F8WFD2 MIR548AR-201ENST00000582191 57 ntBASIC0.98□□□□□ -2.25
NPIPA3F8WFD2 RNU6-1272P-201ENST00000362776 107 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 Y_RNA.84-201ENST00000363011 104 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 Y_RNA.293-201ENST00000364908 93 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms