Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 RPL23AP91-201ENST00000569211 455 ntBASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 AP001094.1-201ENST00000579805 193 ntBASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 AC104695.3-201ENST00000604052 296 ntBASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 RNU6-102P-201ENST00000384485 104 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.509-201ENST00000384506 99 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 MIR15B-201ENST00000385045 98 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 RNU6-823P-201ENST00000391042 103 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 SNORA26.5-201ENST00000391215 123 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 MTCO2P33-201ENST00000402100 465 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.639-201ENST00000458981 102 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 RNU6-437P-201ENST00000459408 95 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.715-201ENST00000517082 110 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 RNU6-897P-201ENST00000517135 105 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 AC023827.1-201ENST00000569247 97 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 MIR4300-201ENST00000581016 96 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 RAC1P9-201ENST00000604990 392 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 MIR376A1-201ENST00000616574 68 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 AC090574.1-201ENST00000623186 233 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 MTND4P29-201ENST00000503122 1372 ntBASIC0.82□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.389-201ENST00000383924 113 ntBASIC0.81□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.418-201ENST00000384029 102 ntBASIC0.81□□□□□ -2.28
NPIPA2E9PIF3 SNORA72.4-201ENST00000384174 132 ntBASIC0.81□□□□□ -2.28
NPIPA2E9PIF3 RNU6-474P-201ENST00000384243 107 ntBASIC0.81□□□□□ -2.28
NPIPA2E9PIF3 MIR1185-1-201ENST00000408598 86 ntBASIC0.81□□□□□ -2.28
NPIPA2E9PIF3 RNU6-191P-201ENST00000516295 94 ntBASIC0.81□□□□□ -2.28
NPIPA2E9PIF3 RNU7-43P-201ENST00000516554 64 ntBASIC0.81□□□□□ -2.28
NPIPA2E9PIF3 MIR548AR-201ENST00000582191 57 ntBASIC0.81□□□□□ -2.28
NPIPA2E9PIF3 AC007742.2-201ENST00000618226 398 ntBASIC0.81□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.394-201ENST00000383942 103 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 RNU6-442P-201ENST00000383968 104 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 SNORD38C-201ENST00000384381 69 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 MIR570-201ENST00000384917 97 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 SNORD28B-201ENST00000390993 75 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 RNU6-1248P-201ENST00000391096 64 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 RNU6-764P-201ENST00000516396 105 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 MIR2681-201ENST00000581814 105 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 AC005357.1-201ENST00000588399 301 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 C8orf59P2-201ENST00000603441 271 ntBASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.28-201ENST00000362554 111 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.183-201ENST00000363882 113 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 SNORD72-201ENST00000390994 80 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 RNU6-101P-201ENST00000410323 104 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 HSPE1P25-201ENST00000455484 251 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 MRPS35P2-201ENST00000508242 191 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 SEPT14P17-201ENST00000617978 177 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 AL160413.1-201ENST00000622780 310 ntBASIC0.79□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.105-201ENST00000363182 111 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 RNU6-268P-201ENST00000364174 107 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.222-201ENST00000364264 102 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 RNU5E-4P-201ENST00000364931 120 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 RNU6-867P-201ENST00000364956 107 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 Y_RNA.569-201ENST00000384749 103 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 RNU6-763P-201ENST00000390865 106 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 SNORD115-46-201ENST00000390982 71 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 RNU6-496P-201ENST00000516145 99 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 AC131055.1-201ENST00000584626 316 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 AC008507.4-201ENST00000585464 127 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 AC087685.1-201ENST00000587507 141 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 Pinc.1-201ENST00000616452 154 ntBASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.78□□□□□ -2.28
NPIPA2E9PIF3 RNU6-674P-201ENST00000363831 107 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 SNORA63.7-201ENST00000365579 123 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 MIR1252-201ENST00000408861 65 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 RPS3AP1-201ENST00000413190 320 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 SNRPGP14-201ENST00000435400 219 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 Y_RNA.631-201ENST00000459607 101 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 AC098869.1-201ENST00000481627 292 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 RN7SKP164-201ENST00000516138 266 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 RNU6-197P-201ENST00000516680 100 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 RNU7-181P-201ENST00000517234 74 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 RNU6-988P-201ENST00000519081 107 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 MIR5000-201ENST00000577717 103 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 AC008133.2-201ENST00000624540 351 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 MIR4251-201ENST00000635819 61 ntBASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NPIPA2E9PIF3 RNU4-90P-201ENST00000362773 141 ntBASIC0.76□□□□□ -2.29
NPIPA2E9PIF3 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms