Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR452-201ENST00000385020 85 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 RPS3AP3-201ENST00000411933 242 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 SNORD2-201ENST00000459163 69 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 AC110760.3-202ENST00000515177 371 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 AL138889.2-201ENST00000603883 242 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 Z94722.1-201ENST00000604328 474 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
COL6A5A8TX70 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 SNORD115-37-201ENST00000363768 82 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 AC007283.2-201ENST00000424739 197 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 RPS3AP52-201ENST00000435639 297 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 MTND1P26-201ENST00000440488 538 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 AC139453.2-201ENST00000487255 133 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 AL158042.1-201ENST00000605338 460 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 AL008636.1-201ENST00000625038 1018 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.33□□□□□ -2.62
COL6A5A8TX70 AC009902.1-201ENST00000519351 183 ntBASIC-1.33□□□□□ -2.62
COL6A5A8TX70 AL512347.1-201ENST00000566420 503 ntBASIC-1.33□□□□□ -2.62
COL6A5A8TX70 AL358934.1-201ENST00000432346 324 ntBASIC-1.33□□□□□ -2.62
COL6A5A8TX70 AC236972.2-201ENST00000434979 310 ntBASIC-1.33□□□□□ -2.62
COL6A5A8TX70 RNU7-104P-201ENST00000459398 79 ntBASIC-1.33□□□□□ -2.62
COL6A5A8TX70 SNORA31.19-201ENST00000517079 126 ntBASIC-1.33□□□□□ -2.62
COL6A5A8TX70 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.33□□□□□ -2.62
COL6A5A8TX70 SNORD115-6-201ENST00000363942 82 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNY3P13-201ENST00000365542 102 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNU4-20P-201ENST00000365601 151 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNU6-592P-201ENST00000411333 103 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 AC020550.1-201ENST00000447385 163 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 AC103996.1-201ENST00000555468 102 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RPL17P51-201ENST00000605218 238 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.34□□□□□ -2.62
COL6A5A8TX70 AP001033.2-201ENST00000609701 1003 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNU6-647P-201ENST00000364243 107 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNU6-828P-201ENST00000364876 107 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 MIR617-201ENST00000385030 97 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 MIR15B-201ENST00000385045 98 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 MIR516B2-201ENST00000385190 85 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNU6-948P-201ENST00000516374 107 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 RNU6-765P-201ENST00000516916 99 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.34□□□□□ -2.62
COL6A5A8TX70 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.34□□□□□ -2.62
COL6A5A8TX70 BNIP3P40-201ENST00000596017 556 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 AC104073.3-201ENST00000610942 955 ntBASIC-1.34□□□□□ -2.62
COL6A5A8TX70 SNORD38B-201ENST00000384690 67 ntBASIC-1.35□□□□□ -2.62
COL6A5A8TX70 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.35□□□□□ -2.62
COL6A5A8TX70 COX7BP2-201ENST00000437976 242 ntBASIC-1.35□□□□□ -2.62
COL6A5A8TX70 U8.22-201ENST00000459141 133 ntBASIC-1.35□□□□□ -2.62
COL6A5A8TX70 MIR6082-201ENST00000613604 109 ntBASIC-1.35□□□□□ -2.62
COL6A5A8TX70 AC068880.4-201ENST00000623082 495 ntBASIC-1.35□□□□□ -2.62
COL6A5A8TX70 AC092656.1-203ENST00000624134 423 ntBASIC-1.35□□□□□ -2.62
COL6A5A8TX70 RNU2-9P-201ENST00000410194 145 ntBASIC-1.35□□□□□ -2.63
COL6A5A8TX70 MTND3P17-201ENST00000416968 344 ntBASIC-1.35□□□□□ -2.63
COL6A5A8TX70 RPL23AP30-201ENST00000432419 501 ntBASIC-1.35□□□□□ -2.63
COL6A5A8TX70 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.35□□□□□ -2.63
COL6A5A8TX70 SNORA43.2-201ENST00000516652 128 ntBASIC-1.35□□□□□ -2.63
COL6A5A8TX70 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.35□□□□□ -2.63
COL6A5A8TX70 MIR548AR-201ENST00000582191 57 ntBASIC-1.35□□□□□ -2.63
COL6A5A8TX70 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.36□□□□□ -2.63
COL6A5A8TX70 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 RNU6-154P-201ENST00000384306 106 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 MIR1253-201ENST00000408273 105 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 MIR1283-1-201ENST00000408494 87 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 MIR548O-201ENST00000408583 114 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 RNU6-916P-201ENST00000516088 109 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.36□□□□□ -2.63
COL6A5A8TX70 MTCYBP33-201ENST00000575007 1130 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 MIR4490-201ENST00000582647 84 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 AP001542.1-201ENST00000591314 200 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 Z97988.1-201ENST00000637697 135 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 RNU6-142P-201ENST00000384019 107 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 RNU6-637P-201ENST00000384050 107 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.36□□□□□ -2.63
COL6A5A8TX70 DISC2.1-201ENST00000612827 205 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 AC027279.3-201ENST00000625055 122 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 RNY3P3-201ENST00000363816 102 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 RNU6-740P-201ENST00000364734 105 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 SNRPGP14-201ENST00000435400 219 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.36□□□□□ -2.63
COL6A5A8TX70 ZNF114P1-201ENST00000453500 292 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 AC068587.5-201ENST00000528506 175 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 AC011373.1-201ENST00000607270 237 ntBASIC-1.36□□□□□ -2.63
COL6A5A8TX70 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.37□□□□□ -2.63
COL6A5A8TX70 MIR570-201ENST00000384917 97 ntBASIC-1.37□□□□□ -2.63
COL6A5A8TX70 RNU7-14P-201ENST00000459331 62 ntBASIC-1.37□□□□□ -2.63
COL6A5A8TX70 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.37□□□□□ -2.63
COL6A5A8TX70 AC131281.1-201ENST00000522984 164 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms