Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 AL133373.1-201ENST00000497098 94 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 SNORD111.1-201ENST00000516421 86 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 RNA5SP61-201ENST00000516453 100 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 SNORA27.4-201ENST00000516650 95 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 AL442663.2-201ENST00000554385 511 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 MIR5692C2-201ENST00000577959 77 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 MIR2681-201ENST00000581814 105 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 AL008718.3-201ENST00000610217 321 ntBASIC1.1□□□□□ -2.23
NKX6-3A6NJ46 AL391987.6-201ENST00000305671 199 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 SNORA25.8-201ENST00000364831 128 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.461-201ENST00000384263 103 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 Y_RNA.483-201ENST00000384380 101 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 RNU6-1289P-201ENST00000384431 106 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 MIR222-201ENST00000384992 110 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 HMGN2P32-201ENST00000444648 269 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 MTND4LP30-201ENST00000454092 297 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 RPL39P39-201ENST00000455840 151 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 AC005840.1-201ENST00000498412 377 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 AL360085.1-201ENST00000604713 532 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 AL096861.1-201ENST00000610899 123 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 AP001282.2-201ENST00000616149 309 ntBASIC1.09□□□□□ -2.23
NKX6-3A6NJ46 MIR367-201ENST00000362299 68 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.14-201ENST00000362415 103 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 RNY1P10-201ENST00000363268 113 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 RNU6-674P-201ENST00000363831 107 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 RNU6-969P-201ENST00000383900 105 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.574-201ENST00000384766 95 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 MT-TW-201ENST00000387382 68 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 MIR1302-6-201ENST00000408466 90 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 TRMT112P2-201ENST00000512910 132 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 AL049861.1-201ENST00000603130 150 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 AL357312.1-201ENST00000603879 298 ntBASIC1.08□□□□□ -2.24
NKX6-3A6NJ46 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.145-201ENST00000363527 102 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.217-201ENST00000364214 105 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 RNU6-392P-201ENST00000364926 101 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 RNU6-442P-201ENST00000383968 104 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 RNU6-910P-201ENST00000390844 107 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 SNORA40.6-201ENST00000391153 128 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 RNU6-651P-201ENST00000411040 105 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.641-201ENST00000459414 105 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.676-201ENST00000516393 96 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 RNU7-40P-201ENST00000516397 64 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 MIR3192-201ENST00000584920 77 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 AC008507.4-201ENST00000585464 127 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 AL353770.2-201ENST00000620024 78 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 MIR8062-201ENST00000621515 85 ntBASIC1.07□□□□□ -2.24
NKX6-3A6NJ46 RNU6-1309P-201ENST00000363305 108 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.176-201ENST00000363815 109 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 RNU6-740P-201ENST00000364734 105 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.327-201ENST00000365201 102 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 RNU6-211P-201ENST00000384047 107 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 RNU6-738P-201ENST00000384531 106 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.572-201ENST00000384757 98 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 MIR520C-201ENST00000385005 87 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 SNORD11-201ENST00000459124 84 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 MIR4724-201ENST00000579485 89 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 MIR4781-201ENST00000585250 76 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 AC006006.1-201ENST00000603082 144 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 AC136443.5-201ENST00000603741 370 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 AC007742.2-201ENST00000618226 398 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 AC015726.2-201ENST00000620112 122 ntBASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.24-201ENST00000362508 103 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.44-201ENST00000362676 108 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.47-201ENST00000362697 108 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 SNORA25.3-201ENST00000363205 127 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.275-201ENST00000364726 110 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 Y_RNA.396-201ENST00000383949 103 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 RNU6-144P-201ENST00000383951 107 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 SNORD38C-201ENST00000384381 69 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 MIR570-201ENST00000384917 97 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 AL603910.2-201ENST00000407268 136 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 MIR548F4-201ENST00000408515 105 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 MTND2P23-201ENST00000422990 651 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 AC023449.1-201ENST00000454464 154 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 SNORD123-201ENST00000459473 70 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 RNU7-41P-201ENST00000515917 61 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 RN7SKP179-201ENST00000516126 217 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 RNU6-327P-201ENST00000516270 127 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 SNORA74.3-201ENST00000517108 154 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 SNORA70.22-201ENST00000517160 124 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 AL022345.2-201ENST00000606307 135 ntBASIC1.05□□□□□ -2.24
NKX6-3A6NJ46 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
NKX6-3A6NJ46 RNU6-268P-201ENST00000364174 107 ntBASIC1.04□□□□□ -2.24
NKX6-3A6NJ46 SNORA25-201ENST00000384384 134 ntBASIC1.04□□□□□ -2.24
NKX6-3A6NJ46 AC245047.7-201ENST00000440265 293 ntBASIC1.04□□□□□ -2.24
NKX6-3A6NJ46 AL117187.1-201ENST00000555482 181 ntBASIC1.04□□□□□ -2.24
NKX6-3A6NJ46 AC087685.1-201ENST00000587507 141 ntBASIC1.04□□□□□ -2.24
NKX6-3A6NJ46 BX284668.6-201ENST00000606899 438 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms