Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RNU6-239P-201ENST00000390990 99 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 SNORA26-201ENST00000391286 122 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-394P-201ENST00000410735 107 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 JTBP1-201ENST00000441314 247 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-126P-201ENST00000516685 103 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNA5SP82-201ENST00000516707 92 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-255P-201ENST00000516957 105 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 AL160236.1-201ENST00000556317 195 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR3144-201ENST00000579460 79 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR378D2-201ENST00000580636 98 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-268P-201ENST00000364174 107 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNA5SP37-201ENST00000365420 130 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-1130P-201ENST00000365434 107 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-1062P-201ENST00000383908 107 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.398-201ENST00000383952 99 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 SNORD116-18-201ENST00000383961 92 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.521-201ENST00000384560 114 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 SNORA64-201ENST00000384674 134 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 SNRPGP14-201ENST00000435400 219 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC104435.1-201ENST00000483483 166 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 RPS27P21-201ENST00000486977 252 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-1270P-201ENST00000517128 108 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 IGKV3-31-201ENST00000523109 329 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC097639.2-201ENST00000603159 172 ntBASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
IGHV4-28A0A0C4DH34 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-1123P-201ENST00000362347 106 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.66-201ENST00000362862 102 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.337-201ENST00000365312 102 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR194-1-201ENST00000384892 85 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC004965.1-201ENST00000413033 213 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 HMGN2P19-201ENST00000425149 265 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 MTND5P41-201ENST00000517498 206 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 SUMO2P16-201ENST00000519475 264 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC103810.8-201ENST00000607347 118 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 AL627230.6-201ENST00000611129 280 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC006441.5-201ENST00000612680 209 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC106754.2-201ENST00000623006 233 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR3658-201ENST00000636291 56 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 ZNF720P1-201ENST00000562403 1939 ntBASIC1.54□□□□□ -2.16
IGHV4-28A0A0C4DH34 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 SNORD61-201ENST00000384252 73 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 SNORA67.3-201ENST00000384366 140 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-768P-201ENST00000384683 107 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR516B2-201ENST00000385190 85 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR676-201ENST00000390702 67 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 SNORA48.3-201ENST00000391081 134 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 SNRPGP13-201ENST00000442212 177 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNA5SP233-201ENST00000459153 113 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 RPL23AP42-201ENST00000471152 471 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-693P-201ENST00000516134 107 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 SNORD116-25-201ENST00000516517 92 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU7-25P-201ENST00000516544 62 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-504P-201ENST00000516568 104 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-1212P-201ENST00000517023 104 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 DEFB122-202ENST00000569013 197 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR6840-201ENST00000611937 71 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR8074-201ENST00000615081 81 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC015726.2-201ENST00000620112 122 ntBASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.53□□□□□ -2.16
IGHV4-28A0A0C4DH34 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
IGHV4-28A0A0C4DH34 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 Y_RNA.170-201ENST00000363746 110 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-457P-201ENST00000363999 107 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-978P-201ENST00000364371 103 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 SNORD24-201ENST00000383884 75 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-449P-201ENST00000383914 107 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 SNORD38C-201ENST00000384381 69 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 AL023284.1-201ENST00000403956 276 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR548O-201ENST00000408583 114 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 AL161935.2-201ENST00000414627 60 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC015922.2-201ENST00000435593 184 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU7-121P-201ENST00000516604 62 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC090142.3-201ENST00000519012 385 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR219B-201ENST00000637023 88 ntBASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
IGHV4-28A0A0C4DH34 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-199P-201ENST00000362954 107 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-888P-201ENST00000363010 101 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-151P-201ENST00000364158 107 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-818P-201ENST00000364837 108 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNA5SP259-201ENST00000365541 109 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 Y_RNA.393-201ENST00000383936 102 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR526A1-201ENST00000384897 85 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR548A2-201ENST00000384956 97 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR452-201ENST00000385020 85 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR513A1-201ENST00000385138 129 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 Y_RNA.580-201ENST00000391004 95 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 CYCSP49-201ENST00000420810 319 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms