Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNY3P15-201ENST00000516297 97 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 RNA5SP404-201ENST00000517118 132 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-988P-201ENST00000519081 107 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 AC127455.1-201ENST00000565496 145 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 AC005357.1-201ENST00000588399 301 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 SNORD113-5-201ENST00000607261 78 ntBASIC0.72□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.19-201ENST00000362462 99 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-1084P-201ENST00000362498 107 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 RNU4-10P-201ENST00000364383 140 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-1187P-201ENST00000364771 110 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 AC117470.1-201ENST00000381974 330 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-662P-201ENST00000384253 104 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-1105P-201ENST00000384774 107 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 SNORD28B-201ENST00000390993 75 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 SNORA75.2-201ENST00000391138 150 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 SNORA75.3-201ENST00000391231 150 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 AL451046.2-201ENST00000403074 277 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-101P-201ENST00000410323 104 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 SNORA36B-201ENST00000410438 131 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 SEPT14P8-201ENST00000508026 178 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 SNORA18.7-201ENST00000516910 131 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 AC136628.3-201ENST00000521868 290 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 AC022616.4-201ENST00000522985 181 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 AL356055.1-201ENST00000602528 446 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 BX284668.6-201ENST00000606899 438 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 AC108706.1-201ENST00000611053 297 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 AC027335.2-201ENST00000624030 375 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 AC027279.3-201ENST00000625055 122 ntBASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.158-201ENST00000363651 101 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-770P-201ENST00000363929 105 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.455-201ENST00000384230 98 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.526-201ENST00000384572 110 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.569-201ENST00000384749 103 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.572-201ENST00000384757 98 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.581-201ENST00000391017 97 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-710P-201ENST00000410424 105 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-1054P-201ENST00000411293 104 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 SNRPGP14-201ENST00000435400 219 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 SNORD124-201ENST00000459577 104 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 MTATP8P1-201ENST00000467115 207 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 SNORD111.1-201ENST00000516421 86 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.713-201ENST00000517013 96 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 RPL23AP91-201ENST00000569211 455 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 FAM71BP1-201ENST00000604431 523 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 AC022709.1-201ENST00000615967 87 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 MIR6515-201ENST00000619843 57 ntBASIC0.7□□□□□ -2.3
TRAV40A0A0B4J280 SNORA33.2-201ENST00000365413 134 ntBASIC0.69□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-969P-201ENST00000383900 105 ntBASIC0.69□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-131P-201ENST00000391144 107 ntBASIC0.69□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-651P-201ENST00000411040 105 ntBASIC0.69□□□□□ -2.3
TRAV40A0A0B4J280 AC002429.1-201ENST00000437672 148 ntBASIC0.69□□□□□ -2.3
TRAV40A0A0B4J280 RPL39P28-201ENST00000465655 155 ntBASIC0.69□□□□□ -2.3
TRAV40A0A0B4J280 SNORD79.1-201ENST00000516069 84 ntBASIC0.69□□□□□ -2.3
TRAV40A0A0B4J280 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.69□□□□□ -2.3
TRAV40A0A0B4J280 CYP3A137P-201ENST00000562436 69 ntBASIC0.69□□□□□ -2.3
TRAV40A0A0B4J280 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.136-201ENST00000363444 102 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 RNY1-201ENST00000364228 113 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 AC245047.8-201ENST00000456455 284 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 SNORD11-201ENST00000459124 84 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-437P-201ENST00000459408 95 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 SNORD123-201ENST00000459473 70 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 AC091959.1-201ENST00000495857 238 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-322P-201ENST00000516010 103 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 RNU7-40P-201ENST00000516397 64 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-570P-201ENST00000517051 105 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 SNORA70.22-201ENST00000517160 124 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 MIR548AR-201ENST00000582191 57 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 PRELID3BP2-201ENST00000605362 201 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 AL008718.3-201ENST00000610217 321 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 AL391903.3-201ENST00000612158 163 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 AC022140.2-201ENST00000623500 188 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 AC008163.1-202ENST00000636004 2889 ntBASIC0.68□□□□□ -2.3
TRAV40A0A0B4J280 RNU4-90P-201ENST00000362773 141 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.84-201ENST00000363011 104 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 Y_RNA.117-201ENST00000363294 101 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-268P-201ENST00000364174 107 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 SNORA25.8-201ENST00000364831 128 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 snoU2-30.1-201ENST00000365012 70 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 RNU6-290P-201ENST00000365212 101 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 MIR452-201ENST00000385020 85 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 MIR1185-1-201ENST00000408598 86 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 MIR1302-7-201ENST00000408841 72 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 SNORD116-28-201ENST00000516123 91 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 SNORA40.15-201ENST00000516884 107 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 RNU7-116P-201ENST00000516940 62 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 SCARNA24.2-201ENST00000516968 130 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 SNORA74.3-201ENST00000517108 154 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 RNU7-181P-201ENST00000517234 74 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 AP003716.2-201ENST00000528260 108 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 AP003733.2-201ENST00000529409 171 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 AC008507.4-201ENST00000585464 127 ntBASIC0.67□□□□□ -2.3
TRAV40A0A0B4J280 AC013244.2-201ENST00000603396 103 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms