Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 Y_RNA.802-201ENST00000614892 130 ntBASIC2.03□□□□□ -2.08
COL4A3BPQ9Y5P4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
COL4A3BPQ9Y5P4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 SNORD14E-201ENST00000364009 85 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-702P-201ENST00000364982 107 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 MIR526A2-201ENST00000390198 65 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 RNA5SP496-201ENST00000391240 109 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU2-38P-201ENST00000410856 79 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-1132P-201ENST00000459214 107 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-237P-201ENST00000515985 71 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-902P-201ENST00000517212 91 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 AC006006.1-201ENST00000603082 144 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 AL365434.2-201ENST00000607979 234 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 AL121890.5-201ENST00000620848 304 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 AC106754.2-201ENST00000623006 233 ntBASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A3BPQ9Y5P4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.117-201ENST00000363294 101 ntBASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 SNORA2.2-201ENST00000365473 135 ntBASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 AC093850.1-201ENST00000454121 251 ntBASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 RPL30P7-201ENST00000479312 323 ntBASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 AL513534.2-201ENST00000603836 250 ntBASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 7SK.10-201ENST00000621414 298 ntBASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 AC084768.2-201ENST00000622736 221 ntBASIC2.01□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.54-201ENST00000362766 105 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.144-201ENST00000363521 113 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.193-201ENST00000363979 102 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.452-201ENST00000384202 108 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 SNORA8.3-201ENST00000384679 139 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.562-201ENST00000384695 113 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 AL603910.2-201ENST00000407268 136 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 SNORD2.1-201ENST00000458762 69 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 AC092991.1-201ENST00000477176 376 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 AC090049.2-201ENST00000550377 109 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 BX284668.6-201ENST00000606899 438 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-457P-201ENST00000363999 107 ntBASIC1.99□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-463P-201ENST00000384340 107 ntBASIC1.99□□□□□ -2.09
COL4A3BPQ9Y5P4 MIR653-201ENST00000385279 96 ntBASIC1.99□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.99□□□□□ -2.09
COL4A3BPQ9Y5P4 AL451046.2-201ENST00000403074 277 ntBASIC1.99□□□□□ -2.09
COL4A3BPQ9Y5P4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A3BPQ9Y5P4 AC062037.2-201ENST00000610137 73 ntBASIC1.99□□□□□ -2.09
COL4A3BPQ9Y5P4 RNA5SP99-201ENST00000364020 114 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 SNORD50B-201ENST00000364995 70 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-442P-201ENST00000383968 104 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.416-201ENST00000384014 113 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.478-201ENST00000384358 107 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 MIR15B-201ENST00000385045 98 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-482P-201ENST00000391068 107 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 MIR4419B-201ENST00000577260 68 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 MIR3149-201ENST00000584629 83 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 AL353997.5-201ENST00000618886 171 ntBASIC1.98□□□□□ -2.09
COL4A3BPQ9Y5P4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A3BPQ9Y5P4 Y_RNA.350-201ENST00000365409 98 ntBASIC1.97□□□□□ -2.09
COL4A3BPQ9Y5P4 snosnR66.1-201ENST00000391095 99 ntBASIC1.97□□□□□ -2.09
COL4A3BPQ9Y5P4 MIR1278-201ENST00000408753 81 ntBASIC1.97□□□□□ -2.09
COL4A3BPQ9Y5P4 RNU6-383P-201ENST00000410864 94 ntBASIC1.97□□□□□ -2.09
COL4A3BPQ9Y5P4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A3BPQ9Y5P4 SNORD11-201ENST00000459124 84 ntBASIC1.97□□□□□ -2.09
COL4A3BPQ9Y5P4 MIR4503-201ENST00000582187 83 ntBASIC1.97□□□□□ -2.09
COL4A3BPQ9Y5P4 MIR4282-201ENST00000583613 67 ntBASIC1.97□□□□□ -2.09
COL4A3BPQ9Y5P4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
COL4A3BPQ9Y5P4 RN7SKP101-201ENST00000411376 320 ntBASIC1.96□□□□□ -2.1
COL4A3BPQ9Y5P4 NDUFA4P2-201ENST00000489989 244 ntBASIC1.96□□□□□ -2.1
COL4A3BPQ9Y5P4 RNU6-250P-201ENST00000516958 103 ntBASIC1.96□□□□□ -2.1
COL4A3BPQ9Y5P4 AC004817.2-201ENST00000561794 651 ntBASIC1.96□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR3618-201ENST00000580330 88 ntBASIC1.96□□□□□ -2.1
COL4A3BPQ9Y5P4 AC008507.4-201ENST00000585464 127 ntBASIC1.96□□□□□ -2.1
COL4A3BPQ9Y5P4 AL357312.1-201ENST00000603879 298 ntBASIC1.96□□□□□ -2.1
COL4A3BPQ9Y5P4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 RNU1-17P-201ENST00000363022 152 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 Y_RNA.277-201ENST00000364754 102 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 AL627390.1-201ENST00000396055 340 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR1298-201ENST00000408783 112 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 RPS27P16-201ENST00000425758 201 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 RNU6-917P-201ENST00000516294 104 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 AC024614.2-201ENST00000577584 372 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR8081-201ENST00000611533 95 ntBASIC1.95□□□□□ -2.1
COL4A3BPQ9Y5P4 SNORD48-201ENST00000364953 64 ntBASIC1.94□□□□□ -2.1
COL4A3BPQ9Y5P4 SNORD38C-201ENST00000384381 69 ntBASIC1.94□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR136-201ENST00000385207 82 ntBASIC1.94□□□□□ -2.1
COL4A3BPQ9Y5P4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.94□□□□□ -2.1
COL4A3BPQ9Y5P4 SNORA25.15-201ENST00000516487 89 ntBASIC1.94□□□□□ -2.1
COL4A3BPQ9Y5P4 RNU6-922P-201ENST00000516753 99 ntBASIC1.94□□□□□ -2.1
COL4A3BPQ9Y5P4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
COL4A3BPQ9Y5P4 AP001485.1-201ENST00000604799 199 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms