Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-1082P-201ENST00000364574 107 ntBASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-360P-201ENST00000390944 104 ntBASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-588P-201ENST00000410281 105 ntBASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 SNRPGP14-201ENST00000435400 219 ntBASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 SNRPGP13-201ENST00000442212 177 ntBASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 snoU13.27-201ENST00000459278 104 ntBASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-426P-201ENST00000516464 97 ntBASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 MIR4709-201ENST00000577272 72 ntBASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 AC008555.8-201ENST00000623602 2168 ntBASIC2.32□□□□□ -2.04
PCDHA9Q9Y5H5 SNORD61-201ENST00000384252 73 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-424P-201ENST00000384367 105 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-163P-201ENST00000384396 106 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 Y_RNA.542-201ENST00000384641 111 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 RNA5SP212-201ENST00000391223 107 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 RNU7-197P-201ENST00000458836 62 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 Y_RNA.666-201ENST00000516187 112 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 SNORA25.12-201ENST00000516202 82 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 RNA5SP148-201ENST00000516527 94 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 AC090142.3-201ENST00000519012 385 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 AC007751.1-201ENST00000529260 376 ntBASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
PCDHA9Q9Y5H5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-833P-201ENST00000363486 107 ntBASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-268P-201ENST00000364174 107 ntBASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 AL359511.1-201ENST00000402970 211 ntBASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 CALM2P4-201ENST00000430810 426 ntBASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 AC114811.1-201ENST00000507207 168 ntBASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-693P-201ENST00000516134 107 ntBASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 RNA5SP168-201ENST00000516642 112 ntBASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHA9Q9Y5H5 AC010332.2-201ENST00000613083 1904 ntBASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 AC016717.2-201ENST00000609089 5141 ntBASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 Y_RNA.251-201ENST00000364551 99 ntBASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-81P-201ENST00000365608 104 ntBASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6-1292P-201ENST00000383856 107 ntBASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 MIR624-201ENST00000385217 97 ntBASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 U8.16-201ENST00000391279 133 ntBASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 AC092991.1-201ENST00000477176 376 ntBASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 AL513423.1-201ENST00000621695 132 ntBASIC2.29□□□□□ -2.04
PCDHA9Q9Y5H5 AC005336.3-201ENST00000623833 2679 ntBASIC2.28□□□□□ -2.04
PCDHA9Q9Y5H5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PCDHA9Q9Y5H5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.28□□□□□ -2.04
PCDHA9Q9Y5H5 RNU7-34P-201ENST00000459394 64 ntBASIC2.28□□□□□ -2.04
PCDHA9Q9Y5H5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
PCDHA9Q9Y5H5 SNORA31.17-201ENST00000516953 127 ntBASIC2.28□□□□□ -2.04
PCDHA9Q9Y5H5 AC021506.2-201ENST00000612354 169 ntBASIC2.28□□□□□ -2.04
PCDHA9Q9Y5H5 AP001340.1-201ENST00000624405 217 ntBASIC2.28□□□□□ -2.04
PCDHA9Q9Y5H5 MIR203B-201ENST00000636080 86 ntBASIC2.28□□□□□ -2.04
PCDHA9Q9Y5H5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 AL157777.2-201ENST00000258070 137 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 SNORD113-1-201ENST00000365321 69 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 MIR548A2-201ENST00000384956 97 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 SNORA40-201ENST00000388090 126 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 Y_RNA.584-201ENST00000391090 114 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 MIR891A-201ENST00000401237 79 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 RNA5SP127-201ENST00000411051 133 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 AL513328.1-201ENST00000446460 224 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 SNORA18.4-201ENST00000516440 124 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 RNU6-1116P-201ENST00000517269 99 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 MIR3162-201ENST00000581818 82 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 AC091895.1-201ENST00000624494 256 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 MIR1291-201ENST00000627649 87 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 AL442644.1-201ENST00000454390 3105 ntBASIC2.27□□□□□ -2.05
PCDHA9Q9Y5H5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 SNORA1-201ENST00000384107 130 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 MIR518F-201ENST00000384973 87 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 Y_RNA.586-201ENST00000391146 98 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 MIR548O-201ENST00000408583 114 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 AC099513.1-201ENST00000490423 301 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 RNU7-12P-201ENST00000516030 62 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 RNU6-1270P-201ENST00000517128 108 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 AC131055.1-201ENST00000584626 316 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 AC134878.1-201ENST00000619901 243 ntBASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.26□□□□□ -2.05
PCDHA9Q9Y5H5 AL136360.1-201ENST00000503377 1900 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms