Protein–RNA interactions for Protein: Q9Y228

TRAF3IP3, TRAF3-interacting JNK-activating modulator, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3Q9Y228 Y_RNA.58-201ENST00000362807 102 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 Y_RNA.154-201ENST00000363624 102 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 Y_RNA.203-201ENST00000364106 102 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 RNY3P1-201ENST00000365085 102 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 RNY3-201ENST00000365484 102 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 SNORD14.1-201ENST00000365609 90 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 RNU6-937P-201ENST00000384325 106 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 RNY1P14-201ENST00000384426 108 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 SNORD28B-201ENST00000390993 75 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 MTND1P14-201ENST00000427400 950 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 HMGN2P32-201ENST00000444648 269 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 MIR3145-201ENST00000580727 82 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 Y_RNA.772-201ENST00000606692 102 ntBASIC0.68□□□□□ -2.3
TRAF3IP3Q9Y228 MIR103A2-201ENST00000362154 78 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 RNU6-801P-201ENST00000364087 105 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 RNU6-1335P-201ENST00000365426 107 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 RNY3P14-201ENST00000384309 102 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 RNU4-30P-201ENST00000410245 143 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 RNU2-14P-201ENST00000411053 191 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 AL160004.2-201ENST00000432935 350 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 RNU6-976P-201ENST00000516086 111 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 AC109810.1-201ENST00000534066 224 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 MIR548AR-201ENST00000582191 57 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 AC104465.1-201ENST00000611365 139 ntBASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAF3IP3Q9Y228 AC134026.1-201ENST00000623249 2239 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 Y_RNA.39-201ENST00000362620 98 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 RNU6-1209P-201ENST00000363655 107 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 Y_RNA.286-201ENST00000364813 102 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 MIR15B-201ENST00000385045 98 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 RNU6-830P-201ENST00000516353 107 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 AC036111.3-201ENST00000526389 112 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 AC004817.2-201ENST00000561794 651 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 AC011373.1-201ENST00000607270 237 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 MIR548AY-201ENST00000617669 107 ntBASIC0.66□□□□□ -2.3
TRAF3IP3Q9Y228 Y_RNA.112-201ENST00000363250 102 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.143-201ENST00000363520 106 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.191-201ENST00000363972 113 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.197-201ENST00000364004 102 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.222-201ENST00000364264 102 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 RNU4-50P-201ENST00000364361 141 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.813-201ENST00000364639 102 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-1009P-201ENST00000390996 107 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 MTND5P20-201ENST00000448677 143 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 RPS29P1-201ENST00000465274 159 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 RNU7-110P-201ENST00000516891 62 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 AC023827.1-201ENST00000569247 97 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 AL138825.1-201ENST00000618587 192 ntBASIC0.65□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.148-201ENST00000363557 117 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-674P-201ENST00000363831 107 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 RNA5SP48-201ENST00000363969 126 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-1048P-201ENST00000364054 107 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-268P-201ENST00000364174 107 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.330-201ENST00000365230 109 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.356-201ENST00000365475 113 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.395-201ENST00000383945 109 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.439-201ENST00000384119 94 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.579-201ENST00000390939 94 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 AL603910.2-201ENST00000407268 136 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 MIR1278-201ENST00000408753 81 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 U8.20-201ENST00000459445 131 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 MIR4452-201ENST00000583004 71 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 AC008507.4-201ENST00000585464 127 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 AL353765.1-201ENST00000605514 183 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 uc_338.22-201ENST00000622722 187 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.164-201ENST00000363709 102 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-654P-201ENST00000364373 107 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.383-201ENST00000383855 97 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 SNORA26.5-201ENST00000391215 123 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 MIR1302-11-201ENST00000408051 138 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 MIR1302-9-201ENST00000408365 138 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 MIR1302-10-201ENST00000408734 138 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 FABP5P4-201ENST00000437203 171 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 SNORD11-201ENST00000459124 84 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 RNU7-141P-201ENST00000459304 62 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 RPL23AP54-201ENST00000495129 419 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-475P-201ENST00000516073 104 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 RNU11-2P-201ENST00000516898 142 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 AC087685.1-201ENST00000587507 141 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 RPS29P30-201ENST00000600975 111 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 AL080274.1-201ENST00000605565 220 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 LARP7P1-201ENST00000605576 316 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 253.5 ms