Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MIR489-201ENST00000384923 84 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 MIR520C-201ENST00000385005 87 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 MIR136-201ENST00000385207 82 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 AL590004.1-201ENST00000405321 300 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 MTND5P20-201ENST00000448677 143 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.62□□□□□ -2.31
CDH9Q9ULB4 RN7SKP295-201ENST00000517264 153 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 AC109810.1-201ENST00000534066 224 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 AC023827.1-201ENST00000569247 97 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 AL512605.2-201ENST00000592972 256 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 AC133104.2-201ENST00000615272 193 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 AL606534.2-204ENST00000635008 178 ntBASIC0.62□□□□□ -2.31
CDH9Q9ULB4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CDH9Q9ULB4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CDH9Q9ULB4 SNORA25.3-201ENST00000363205 127 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 RNY1-201ENST00000364228 113 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 SNORD50B-201ENST00000364995 70 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.395-201ENST00000383945 109 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.428-201ENST00000384078 102 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.462-201ENST00000384268 102 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 MIR15B-201ENST00000385045 98 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 MIR516B2-201ENST00000385190 85 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 MIR1185-1-201ENST00000408598 86 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 U7.7-201ENST00000459276 60 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 RNU7-41P-201ENST00000515917 61 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 RNA5SP436-201ENST00000516020 115 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 SNORA40.14-201ENST00000516543 86 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 SNORD116.3-201ENST00000517176 78 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 MIR548S-201ENST00000581352 82 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 AC025627.3-201ENST00000582078 182 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 DEFB117-201ENST00000602356 141 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 AC006380.1-201ENST00000603598 186 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 AC005972.2-201ENST00000604690 348 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 MIR6513-201ENST00000621188 64 ntBASIC0.61□□□□□ -2.31
CDH9Q9ULB4 RNU4-73P-201ENST00000363164 141 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.112-201ENST00000363250 102 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.368-201ENST00000365547 113 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 SNORD14.1-201ENST00000365609 90 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 RNU6-1323P-201ENST00000384025 107 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 SNORD63-201ENST00000384262 68 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 SNORA72-201ENST00000384339 132 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.579-201ENST00000390939 94 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 RNU6-1009P-201ENST00000390996 107 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 MTCO2P27-201ENST00000420740 428 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 MTND1P14-201ENST00000427400 950 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.6□□□□□ -2.31
CDH9Q9ULB4 SNRPGP14-201ENST00000435400 219 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.6□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.702-201ENST00000516843 96 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 MIR4795-201ENST00000584182 89 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 AC007485.1-201ENST00000616755 206 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 uc_338.22-201ENST00000622722 187 ntBASIC0.6□□□□□ -2.31
CDH9Q9ULB4 RNA5SP347-201ENST00000362445 119 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 RNU6-324P-201ENST00000363957 106 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.197-201ENST00000364004 102 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.813-201ENST00000364639 102 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.286-201ENST00000364813 102 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 Y_RNA.356-201ENST00000365475 113 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 SNORD42.2-201ENST00000365570 69 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 RNU6-937P-201ENST00000384325 106 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 MIR628-201ENST00000385229 95 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 MIR1302-7-201ENST00000408841 72 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 AC005042.3-201ENST00000453230 174 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 HMGN1P10-201ENST00000474557 553 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 AC098869.1-201ENST00000481627 292 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.59□□□□□ -2.31
CDH9Q9ULB4 MTND3P22-201ENST00000510932 243 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 RNU6-976P-201ENST00000516086 111 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 RNU7-43P-201ENST00000516554 64 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 AC022616.4-201ENST00000522985 181 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 MIR4764-201ENST00000580680 88 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 MIR3145-201ENST00000580727 82 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 AL121655.1-201ENST00000605811 308 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.59□□□□□ -2.31
CDH9Q9ULB4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.59□□□□□ -2.31
CDH9Q9ULB4 AC068700.1-201ENST00000565862 3754 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
CDH9Q9ULB4 RNA5SP48-201ENST00000363969 126 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 Y_RNA.222-201ENST00000364264 102 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 U8.7-201ENST00000364940 136 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 Y_RNA.509-201ENST00000384506 99 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 Y_RNA.551-201ENST00000384661 102 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 SNORD89-201ENST00000390981 114 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 Y_RNA.645-201ENST00000391229 102 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 SNORD99-201ENST00000408612 74 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 RNU2-14P-201ENST00000411053 191 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
CDH9Q9ULB4 AL160004.2-201ENST00000432935 350 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 NDUFA4P2-201ENST00000489989 244 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 RN7SKP164-201ENST00000516138 266 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 SNORD45.4-201ENST00000516629 73 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 SNORA18.7-201ENST00000516910 131 ntBASIC0.58□□□□□ -2.32
CDH9Q9ULB4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms