Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 AC236972.2-201ENST00000434979 310 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 RNU6-135P-201ENST00000516769 101 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 ZNF519P2-201ENST00000557032 169 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 AP001330.5-201ENST00000607176 411 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 AC006157.1-201ENST00000611750 366 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 MIR8064-201ENST00000612863 90 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 uc_338.36-201ENST00000622331 158 ntBASIC-0.66□□□□□ -2.52
VPS29Q9UBQ0 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 AC087499.4-201ENST00000448505 178 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 PRDX4P1-201ENST00000507189 574 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 RNU6-180P-201ENST00000516697 61 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 RNA5SP47-201ENST00000517230 109 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 MTND1P24-201ENST00000552175 861 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 MIR3152-201ENST00000579801 74 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 RNU6-89P-201ENST00000606519 100 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.67□□□□□ -2.52
VPS29Q9UBQ0 RNU6-596P-201ENST00000365395 98 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 RNU6-767P-201ENST00000384132 107 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 RNU6-306P-201ENST00000384617 107 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 MT-TF-201ENST00000387314 71 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 MIR190B-201ENST00000401119 79 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 AL365203.2-201ENST00000423444 196 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 RNU1-29P-201ENST00000606574 126 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 JPX_2.1-201ENST00000614161 69 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.68□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 SNORA24-201ENST00000384096 131 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 RNU6-648P-201ENST00000410190 107 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 RNU2-61P-201ENST00000411069 191 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 CHEK2P4-201ENST00000450340 246 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 snoU13.2-201ENST00000459201 104 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 MTATP6P24-201ENST00000576835 677 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 MIR4528-201ENST00000577763 90 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 MIR8066-201ENST00000617280 78 ntBASIC-0.69□□□□□ -2.52
VPS29Q9UBQ0 RNA5SP257-201ENST00000363023 116 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 MIR196A2-201ENST00000385189 110 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 MIR501-201ENST00000390204 84 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 RNU6-192P-201ENST00000391253 100 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 HMGN2P22-201ENST00000427588 175 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 MTCO1P5-201ENST00000433573 344 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 RNU7-87P-201ENST00000459343 62 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 AC107297.1-201ENST00000459991 176 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 RNU2-60P-201ENST00000517290 128 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 LRRC34P1-201ENST00000542742 915 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 AC073648.5-201ENST00000603502 305 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 AC027449.1-201ENST00000608890 407 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 AC004467.1-201ENST00000615678 330 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 FTX_2.1-201ENST00000618816 94 ntBASIC-0.7□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.71□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.71□□□□□ -2.52
VPS29Q9UBQ0 RNU4-55P-201ENST00000410731 137 ntBASIC-0.71□□□□□ -2.52
VPS29Q9UBQ0 RNU4-83P-201ENST00000410863 133 ntBASIC-0.71□□□□□ -2.52
VPS29Q9UBQ0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.71□□□□□ -2.52
VPS29Q9UBQ0 RNU6-835P-201ENST00000516974 104 ntBASIC-0.71□□□□□ -2.52
VPS29Q9UBQ0 SCARNA1-201ENST00000517138 166 ntBASIC-0.71□□□□□ -2.52
VPS29Q9UBQ0 AC121247.2-201ENST00000604776 136 ntBASIC-0.71□□□□□ -2.52
VPS29Q9UBQ0 AL442067.1-201ENST00000613261 223 ntBASIC-0.71□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 RNU6-318P-201ENST00000384283 103 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 MIR215-201ENST00000384858 110 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 MIR563-201ENST00000385080 79 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 SNORA75.4-201ENST00000391278 119 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 RNU4-30P-201ENST00000410245 143 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 RNU7-67P-201ENST00000459003 62 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 AC008507.4-201ENST00000585464 127 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 MIR4788-201ENST00000639104 80 ntBASIC-0.72□□□□□ -2.52
VPS29Q9UBQ0 MIR30D-201ENST00000362283 70 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 SNORD49B-201ENST00000365172 72 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 SNORD28-201ENST00000384706 75 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 MTND4LP11-201ENST00000422184 280 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 SNORA31.14-201ENST00000516728 116 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 RNU6-256P-201ENST00000516747 97 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 AC006441.5-201ENST00000612680 209 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 MIR6514-201ENST00000622549 70 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 Z97988.1-201ENST00000637697 135 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 MIR6759-201ENST00000638110 65 ntBASIC-0.73□□□□□ -2.53
VPS29Q9UBQ0 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.74□□□□□ -2.53
VPS29Q9UBQ0 RNU6-923P-201ENST00000364753 107 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms