Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MIR802-201ENST00000390235 94 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 SNORD89-201ENST00000390981 114 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.718-201ENST00000517110 102 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 AC093027.1-201ENST00000546698 429 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 RBM11P1-201ENST00000604951 799 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 AL353765.1-201ENST00000605514 183 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.772-201ENST00000606692 102 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 JPX_2.1-201ENST00000614161 69 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 AC007742.2-201ENST00000618226 398 ntBASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.148-201ENST00000363557 117 ntBASIC0.75□□□□□ -2.29
HMG20BQ9P0W2 RNA5SP499-201ENST00000363982 119 ntBASIC0.75□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.203-201ENST00000364106 102 ntBASIC0.75□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.310-201ENST00000365063 113 ntBASIC0.75□□□□□ -2.29
HMG20BQ9P0W2 RPS26P5-201ENST00000418544 335 ntBASIC0.75□□□□□ -2.29
HMG20BQ9P0W2 AL035398.1-201ENST00000430869 322 ntBASIC0.75□□□□□ -2.29
HMG20BQ9P0W2 RPL23AP54-201ENST00000495129 419 ntBASIC0.75□□□□□ -2.29
HMG20BQ9P0W2 DEFB117-201ENST00000602356 141 ntBASIC0.75□□□□□ -2.29
HMG20BQ9P0W2 AC104465.1-201ENST00000611365 139 ntBASIC0.75□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.456-201ENST00000384232 111 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.463-201ENST00000384271 102 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 SNORD38C-201ENST00000384381 69 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 AL590004.1-201ENST00000405321 300 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 AC067940.1-201ENST00000458411 300 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 U7.7-201ENST00000459276 60 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.661-201ENST00000516003 99 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 RN7SKP164-201ENST00000516138 266 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 RNU6-277P-201ENST00000516272 106 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 RNU7-110P-201ENST00000516891 62 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 AC024405.2-202ENST00000532731 184 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 AC025627.3-201ENST00000582078 182 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 RPS29P30-201ENST00000600975 111 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 AC011373.1-201ENST00000607270 237 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 7SK.10-201ENST00000621414 298 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 MIR4272-201ENST00000635924 64 ntBASIC0.74□□□□□ -2.29
HMG20BQ9P0W2 MIR216A-201ENST00000385063 110 ntBASIC0.73□□□□□ -2.29
HMG20BQ9P0W2 RNU6-994P-201ENST00000410507 111 ntBASIC0.73□□□□□ -2.29
HMG20BQ9P0W2 MTCO2P27-201ENST00000420740 428 ntBASIC0.73□□□□□ -2.29
HMG20BQ9P0W2 AC091951.2-201ENST00000500762 203 ntBASIC0.73□□□□□ -2.29
HMG20BQ9P0W2 RN7SL793P-201ENST00000583259 296 ntBASIC0.73□□□□□ -2.29
HMG20BQ9P0W2 MIR6513-201ENST00000621188 64 ntBASIC0.73□□□□□ -2.29
HMG20BQ9P0W2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.73□□□□□ -2.29
HMG20BQ9P0W2 MIR4251-201ENST00000635819 61 ntBASIC0.73□□□□□ -2.29
HMG20BQ9P0W2 AC134026.1-201ENST00000623249 2239 ntBASIC0.73□□□□□ -2.29
HMG20BQ9P0W2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.462-201ENST00000384268 102 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 AC113410.1-201ENST00000505029 247 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 RNU11-2P-201ENST00000516898 142 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 AC004817.2-201ENST00000561794 651 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 MIR4423-201ENST00000580922 80 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 MIR548AR-201ENST00000582191 57 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 UBE2V2P2-201ENST00000587677 504 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 AC092447.9-201ENST00000603395 144 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 AP003357.1-201ENST00000604497 148 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 RNU6-94P-201ENST00000607728 107 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 AC010205.1-201ENST00000616668 449 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 AC008133.2-201ENST00000624540 351 ntBASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.39-201ENST00000362620 98 ntBASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 Y_RNA.187-201ENST00000363918 113 ntBASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 U8.7-201ENST00000364940 136 ntBASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 RNU6-442P-201ENST00000383968 104 ntBASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 SNORD111-201ENST00000408139 94 ntBASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 RNU7-115P-201ENST00000516433 55 ntBASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 AC036111.3-201ENST00000526389 112 ntBASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
HMG20BQ9P0W2 SNORD81.1-201ENST00000363064 77 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 RNU6-1209P-201ENST00000363655 107 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 Y_RNA.390-201ENST00000383932 102 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 Y_RNA.458-201ENST00000384240 102 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 RNU6-21P-201ENST00000384710 107 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 RNU6-1067P-201ENST00000384752 107 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 AC005534.2-201ENST00000431047 433 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 RBMX2P4-201ENST00000441256 376 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 AL355375.2-201ENST00000574825 175 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 MIR3145-201ENST00000580727 82 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 AC087685.1-201ENST00000587507 141 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 AL132765.2-201ENST00000610812 351 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.7□□□□□ -2.3
HMG20BQ9P0W2 SNORD113.3-201ENST00000364630 78 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 MIR92A1-201ENST00000385233 78 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 SNORD28B-201ENST00000390993 75 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 AL160004.2-201ENST00000432935 350 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 Y_RNA.632-201ENST00000459189 102 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 RNU6-1110P-201ENST00000516462 101 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 AP003484.1-201ENST00000530974 250 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 MIR5188-201ENST00000583467 113 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 AL121655.1-201ENST00000605811 308 ntBASIC0.69□□□□□ -2.3
HMG20BQ9P0W2 MIR548AY-201ENST00000617669 107 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms