Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RN7SKP51-201ENST00000410781 304 ntBASIC1.99□□□□□ -2.09
DDX56Q9NY93 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
DDX56Q9NY93 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.99□□□□□ -2.09
DDX56Q9NY93 AC019176.1-201ENST00000518519 225 ntBASIC1.99□□□□□ -2.09
DDX56Q9NY93 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.99□□□□□ -2.09
DDX56Q9NY93 RNU6-1209P-201ENST00000363655 107 ntBASIC1.98□□□□□ -2.09
DDX56Q9NY93 Y_RNA.476-201ENST00000384347 108 ntBASIC1.98□□□□□ -2.09
DDX56Q9NY93 Y_RNA.572-201ENST00000384757 98 ntBASIC1.98□□□□□ -2.09
DDX56Q9NY93 MIR802-201ENST00000390235 94 ntBASIC1.98□□□□□ -2.09
DDX56Q9NY93 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.98□□□□□ -2.09
DDX56Q9NY93 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
DDX56Q9NY93 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
DDX56Q9NY93 AL513534.2-201ENST00000603836 250 ntBASIC1.98□□□□□ -2.09
DDX56Q9NY93 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.98□□□□□ -2.09
DDX56Q9NY93 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
DDX56Q9NY93 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
DDX56Q9NY93 Y_RNA.24-201ENST00000362508 103 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 Y_RNA.796-201ENST00000364268 102 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 Y_RNA.799-201ENST00000364992 102 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 SNORA2.2-201ENST00000365473 135 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 MIR452-201ENST00000385020 85 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 PIGPP3-201ENST00000425307 415 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 RPL30P7-201ENST00000479312 323 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 AC114811.1-201ENST00000507207 168 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 RNU6-388P-201ENST00000517012 105 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 RNU6-389P-201ENST00000517048 105 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 RPL23AP91-201ENST00000569211 455 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 MIR4724-201ENST00000579485 89 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 AL365434.2-201ENST00000607979 234 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX56Q9NY93 Y_RNA.802-201ENST00000614892 130 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 AC106754.2-201ENST00000623006 233 ntBASIC1.97□□□□□ -2.09
DDX56Q9NY93 MIR367-201ENST00000362299 68 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 Y_RNA.304-201ENST00000365011 112 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 RNY4P28-201ENST00000365281 93 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 RNU6-969P-201ENST00000383900 105 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.96□□□□□ -2.1
DDX56Q9NY93 RNU4-71P-201ENST00000516258 113 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 SNORD45.4-201ENST00000516629 73 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 RNU6-1116P-201ENST00000517269 99 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 AC090049.2-201ENST00000550377 109 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
DDX56Q9NY93 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 AC078938.1-201ENST00000620993 318 ntBASIC1.96□□□□□ -2.1
DDX56Q9NY93 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
DDX56Q9NY93 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
DDX56Q9NY93 SNORD14E-201ENST00000364009 85 ntBASIC1.95□□□□□ -2.1
DDX56Q9NY93 SNORA8.3-201ENST00000384679 139 ntBASIC1.95□□□□□ -2.1
DDX56Q9NY93 MIR626-201ENST00000385032 94 ntBASIC1.95□□□□□ -2.1
DDX56Q9NY93 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.95□□□□□ -2.1
DDX56Q9NY93 AL451046.2-201ENST00000403074 277 ntBASIC1.95□□□□□ -2.1
DDX56Q9NY93 AC093850.1-201ENST00000454121 251 ntBASIC1.95□□□□□ -2.1
DDX56Q9NY93 RNY3P16-201ENST00000516338 101 ntBASIC1.95□□□□□ -2.1
DDX56Q9NY93 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX56Q9NY93 MIR5688-201ENST00000580619 83 ntBASIC1.95□□□□□ -2.1
DDX56Q9NY93 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
DDX56Q9NY93 SNORA16.1-201ENST00000364597 132 ntBASIC1.94□□□□□ -2.1
DDX56Q9NY93 RNA5SP126-201ENST00000365092 109 ntBASIC1.94□□□□□ -2.1
DDX56Q9NY93 Y_RNA.336-201ENST00000365307 109 ntBASIC1.94□□□□□ -2.1
DDX56Q9NY93 MIR526A2-201ENST00000390198 65 ntBASIC1.94□□□□□ -2.1
DDX56Q9NY93 Y_RNA.626-201ENST00000411288 95 ntBASIC1.94□□□□□ -2.1
DDX56Q9NY93 AC107393.1-201ENST00000512403 346 ntBASIC1.94□□□□□ -2.1
DDX56Q9NY93 AC100767.1-201ENST00000528178 123 ntBASIC1.94□□□□□ -2.1
DDX56Q9NY93 RNU6-653P-201ENST00000363074 106 ntBASIC1.93□□□□□ -2.1
DDX56Q9NY93 RNU6-457P-201ENST00000363999 107 ntBASIC1.93□□□□□ -2.1
DDX56Q9NY93 Y_RNA.262-201ENST00000364641 102 ntBASIC1.93□□□□□ -2.1
DDX56Q9NY93 MIR653-201ENST00000385279 96 ntBASIC1.93□□□□□ -2.1
DDX56Q9NY93 RNA5SP496-201ENST00000391240 109 ntBASIC1.93□□□□□ -2.1
DDX56Q9NY93 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
DDX56Q9NY93 AC092991.1-201ENST00000477176 376 ntBASIC1.93□□□□□ -2.1
DDX56Q9NY93 RNY1-201ENST00000364228 113 ntBASIC1.92□□□□□ -2.1
DDX56Q9NY93 Y_RNA.308-201ENST00000365043 101 ntBASIC1.92□□□□□ -2.1
DDX56Q9NY93 SNORA70B-201ENST00000384210 135 ntBASIC1.92□□□□□ -2.1
DDX56Q9NY93 MIR15B-201ENST00000385045 98 ntBASIC1.92□□□□□ -2.1
DDX56Q9NY93 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.92□□□□□ -2.1
DDX56Q9NY93 NDUFA4P2-201ENST00000489989 244 ntBASIC1.92□□□□□ -2.1
DDX56Q9NY93 MIR4648-201ENST00000580107 72 ntBASIC1.92□□□□□ -2.1
DDX56Q9NY93 AL357312.1-201ENST00000603879 298 ntBASIC1.92□□□□□ -2.1
DDX56Q9NY93 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
DDX56Q9NY93 Y_RNA.199-201ENST00000364014 102 ntBASIC1.91□□□□□ -2.1
DDX56Q9NY93 SNORD50B-201ENST00000364995 70 ntBASIC1.91□□□□□ -2.1
DDX56Q9NY93 MIR1298-201ENST00000408783 112 ntBASIC1.91□□□□□ -2.1
DDX56Q9NY93 SNORD11-201ENST00000459124 84 ntBASIC1.91□□□□□ -2.1
DDX56Q9NY93 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.91□□□□□ -2.1
DDX56Q9NY93 AC024614.2-201ENST00000577584 372 ntBASIC1.91□□□□□ -2.1
DDX56Q9NY93 AL049861.1-201ENST00000603130 150 ntBASIC1.91□□□□□ -2.1
DDX56Q9NY93 AP001485.1-201ENST00000604799 199 ntBASIC1.91□□□□□ -2.1
DDX56Q9NY93 AC141273.2-201ENST00000618989 130 ntBASIC1.91□□□□□ -2.1
DDX56Q9NY93 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DDX56Q9NY93 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
DDX56Q9NY93 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
DDX56Q9NY93 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
DDX56Q9NY93 U8.2-201ENST00000363156 134 ntBASIC1.9□□□□□ -2.11
DDX56Q9NY93 snoU2_19.4-201ENST00000364329 80 ntBASIC1.9□□□□□ -2.11
DDX56Q9NY93 RNU6-442P-201ENST00000383968 104 ntBASIC1.9□□□□□ -2.11
DDX56Q9NY93 Y_RNA.552-201ENST00000384665 112 ntBASIC1.9□□□□□ -2.11
DDX56Q9NY93 AL445685.2-201ENST00000422551 342 ntBASIC1.9□□□□□ -2.11
DDX56Q9NY93 RPS27P16-201ENST00000425758 201 ntBASIC1.9□□□□□ -2.11
DDX56Q9NY93 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.9□□□□□ -2.11
DDX56Q9NY93 RNU6-970P-201ENST00000516312 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms